RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LINC01560Q8TB33 94 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 KLF14Q8TD94 323 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 RAPGEF5Q92565 580 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 HGDQ93099 445 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC25A36Q96CQ1 311 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAHD2AQ96GK7 314 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SMIM10Q96HG1 83 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 AMDHD1Q96NU7 426 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CCNL2Q96S94 520 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 PKMYT1Q99640 499 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SRMSQ9H3Y6 488 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SMYD3Q9H7B4 428 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 YY1AP1Q9H869 796 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 IL26Q9NPH9 171 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 GLRX2Q9NS18 164 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 C1orf123Q9NWV4 160 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 QPCTLQ9NXS2 382 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 NDUFA13Q9P0J0 144 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAM153AQ9UHL3 310 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 BCAP29Q9UHQ4 241 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CYTH4Q9UIA0 394 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 TTLL3Q9Y4R7 772 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 OARD1Q9Y530 152 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SNX5Q9Y5X3 404 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 F11RQ9Y624 299 aaKnown RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SVILO95425 2214 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 ADAMTS13Q76LX8 1427 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 CCDC69A6NI79 296 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 OR6C70A6NIJ9 312 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ANKRD30BLA7E2S9 258 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 C12orf71A8MTZ7 269 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 H0Y626 953 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 DCTN6O00399 190 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 PRKYO43930 277 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 UQCRBP14927 111 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 IL1RNP18510 177 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 PAICSP22234 425 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 DPP4P27487 766 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 PTPN6P29350 595 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SHMT2P34897 504 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 KRT20P35900 424 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 TCF7P36402 384 aaPredicted RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 NUMBP49757 651 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ZNF83P51522 516 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 PRKXP51817 358 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 CNN1P51911 297 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 IFT88Q13099 833 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 RIPK1Q13546 671 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 CUL1Q13616 776 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 FZD2Q14332 565 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ADPRMQ3LIE5 342 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 HECTD3Q5T447 861 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SYT10Q6XYQ8 523 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 Q6ZN92 141 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 NLRP9Q7RTR0 991 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 C16orf62Q7Z3J2 963 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 THOC6Q86W42 341 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 UNC45BQ8IWX7 931 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 LINC01561Q8N1V8 128 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SFRP1Q8N474 314 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 LSMEM1Q8N8F7 131 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SPANXA2-OT1Q8N9U9 137 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 LEMD2Q8NC56 503 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 LILRB4Q8NHJ6 448 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 M1APQ8TC57 530 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 C17orf50Q8WW18 174 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 RPL3LQ92901 407 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 UPRTQ96BW1 309 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 TM4SF18Q96CE8 201 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 AKR1E2Q96JD6 320 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 WFIKKN1Q96NZ8 548 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ZNF607Q96SK3 696 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SLC30A2Q9BRI3 323 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 WRAP53Q9BUR4 548 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 RIOK2Q9BVS4 552 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 MRPL9Q9BYD2 267 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 OSBPL8Q9BZF1 889 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 POLR1EQ9GZS1 481 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 POLD4Q9HCU8 107 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 DDX19AQ9NUU7 478 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 MRPL39Q9NYK5 338 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 CFDP1Q9UEE9 299 aaPredicted RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ENOPH1Q9UHY7 261 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 MCTS1Q9ULC4 181 aaKnown RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 ZNF490Q9ULM2 529 aaPredicted RBP-0.03□□□□□ -2.41
COPB1-212ENST00000534771 SIGLEC7Q9Y286 467 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 COL4A1P02462 1669 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 KAT6BQ8WYB5 2073 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 TICRRQ7Z2Z1 1910 aa-0.03□□□□□ -2.41
COPB1-212ENST00000534771 CCDC7Q96M83 1385 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 IGHV2-70DA0A0C4DH43 119 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 A0A1B0GVI7 797 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TMEM120BA0PK00 339 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TMEM89A2RUT3 159 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 ZNF716A6NP11 495 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TAPBPO15533 448 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 CCDC22O60826 627 aa-0.04□□□□□ -2.42
COPB1-212ENST00000534771 TBCAO75347 108 aaKnown RBP-0.04□□□□□ -2.42
COPB1-212ENST00000534771 GCM2O75603 506 aaPredicted RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms