RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 MDP1Q86V88 176 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 SLC22A9Q8IVM8 553 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 CLEC4FQ8N1N0 589 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 SPATA4Q8NEY3 305 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 OR56A1Q8NGH5 318 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 METTL2AQ96IZ6 378 aaKnown RBP10.5□□□□□ -0.73
SVIP-205ENST00000533774 ZNF350Q9GZX5 532 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 TUBB1Q9H4B7 451 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 CRLF2Q9HC73 371 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 ZNF69Q9UC07 566 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 ATP6V1HQ9UI12 483 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 FZR1Q9UM11 496 aa10.5□□□□□ -0.73
SVIP-205ENST00000533774 LIPT2A6NK58 231 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 AQP7P3A6NL99 342 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 PIP5K1BO14986 540 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 KRT33AO76009 404 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 ALX3O95076 343 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 IGHV2-5P01817 119 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 NAT2P11245 290 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 OMGP23515 440 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 FPR2P25090 351 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 GCH1P30793 250 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 MAGEB1P43366 347 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 RPL38P63173 70 aaKnown RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 CEACAM7Q14002 265 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 AP1ARQ63HQ0 302 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 CREB3L2Q70SY1 520 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 RHOUQ7L0Q8 258 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 ABHD12BQ7Z5M8 362 aaPredicted RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 GPAT4Q86UL3 456 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 EPHX4Q8IUS5 362 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 CNOT9Q92600 299 aaKnown RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 MTERF3Q96E29 417 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 ZNF75AQ96N20 296 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 NAPGQ99747 312 aaPredicted RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 SF3B5Q9BWJ5 86 aaKnown RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 C7orf69Q9H7B7 122 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 GIMAP2Q9UG22 337 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 EMCNQ9ULC0 261 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 PCDHGB4Q9UN71 923 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 UTP11Q9Y3A2 253 aaKnown RBP10.49□□□□□ -0.73
SVIP-205ENST00000533774 DOCK11Q5JSL3 2073 aa10.49□□□□□ -0.73
SVIP-205ENST00000533774 G3V2L1 256 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 J3QL48 77 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 SCAMP2O15127 329 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 ZNF208O43345 1280 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 CDC14BO60729 498 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 STX11O75558 287 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 SEC14L2O76054 403 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 RNASE1P07998 156 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 ANPEPP15144 967 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 PAX7P23759 505 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 FKBP2P26885 142 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 GCAP28676 217 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 TACR3P29371 465 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 PHBP35232 272 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 GNG11P61952 73 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 ROR2Q01974 943 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 FUT5Q11128 374 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 OR7A5Q15622 319 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 ALKBH6Q3KRA9 238 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 ARHGAP11BQ3KRB8 267 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 SPDYE7PQ495Y7 208 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 FBLN7Q53RD9 439 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 KLF17Q5JT82 389 aaPredicted RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 TYW3Q6IPR3 259 aaKnown RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 NIPAL3Q6P499 406 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 FRMD7Q6ZUT3 714 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 SFXN5Q8TD22 340 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 OR5P2Q8WZ92 322 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 DDIT4LQ96D03 193 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 ZNF317Q96PQ6 595 aaPredicted RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 MS4A5Q9H3V2 200 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 OXSMQ9NWU1 459 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 B3GNT2Q9NY97 397 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 ZNF180Q9UJW8 692 aa10.48□□□□□ -0.73
SVIP-205ENST00000533774 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
SVIP-205ENST00000533774 SLC28A1O00337 649 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 LSM1O15116 133 aaKnown RBP10.47□□□□□ -0.73
SVIP-205ENST00000533774 ZSCAN12O43309 604 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 KRT16P08779 473 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 SNRPAP09012 282 aaKnown RBP10.47□□□□□ -0.73
SVIP-205ENST00000533774 LINC00032P0C843 101 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 UROSP10746 265 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 ZNF35P13682 527 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 MATN1P21941 496 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 ARR3P36575 388 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 POLR2HP52434 150 aaKnown RBP10.47□□□□□ -0.73
SVIP-205ENST00000533774 KRTAP10-3P60369 221 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 SLC7A5Q01650 507 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 BAMBIQ13145 260 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 OXLD1Q5BKU9 147 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 TIFABQ6ZNK6 161 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
SVIP-205ENST00000533774 RELL1Q8IUW5 271 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 SYT14Q8NB59 555 aa10.47□□□□□ -0.73
SVIP-205ENST00000533774 KIF18AQ8NI77 898 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms