RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PIEZO2Q9H5I5 2752 aa11.21□□□□□ -0.62
COPB1-208ENST00000532088 SPENQ96T58 3664 aaKnown RBP11.21□□□□□ -0.62
COPB1-208ENST00000532088 CD8B2A6NJW9 211 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ENO4A6NNW6 628 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 SULT2B1O00204 365 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 SEC14L5O43304 696 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 KLF4O43474 513 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 OR10H3O60404 316 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 OR7A10O76100 309 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ADAP00813 363 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 TSPAN19P0C672 248 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ASAH2BP0C7U1 165 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 FCGR2AP12318 317 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 IFI30P13284 250 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ANPEPP15144 967 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ABOP16442 354 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 FPR3P25089 353 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 RPS5P46782 204 aaKnown RBP11.2□□□□□ -0.62
COPB1-208ENST00000532088 NUP107P57740 925 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 H3F3AP84243 136 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 RCN1Q15293 331 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 CD300LDQ6UXZ3 194 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 SLC46A3Q7Z3Q1 461 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 AMIGO2Q86SJ2 522 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 UBQLNLQ8IYU4 475 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 SLC43A2Q8N370 569 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 ZNF843Q8N446 348 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 OR10G2Q8NGC3 310 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 PFN4Q8NHR9 129 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 GNPDA2Q8TDQ7 276 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 OSTF1Q92882 214 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 NAA11Q9BSU3 229 aaPredicted RBP11.2□□□□□ -0.62
COPB1-208ENST00000532088 TP63Q9H3D4 680 aaPredicted RBP11.2□□□□□ -0.62
COPB1-208ENST00000532088 CALHM2Q9HA72 323 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 GP6Q9HCN6 339 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 C8orf4Q9NR00 106 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 NANSQ9NR45 359 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 MRPL39Q9NYK5 338 aaKnown RBP11.2□□□□□ -0.62
COPB1-208ENST00000532088 MCTS1Q9ULC4 181 aaKnown RBP11.2□□□□□ -0.62
COPB1-208ENST00000532088 CAMK2AQ9UQM7 478 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 B3GALT5Q9Y2C3 310 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 U3KQV3 271 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 COL6A6A6NMZ7 2263 aa11.2□□□□□ -0.62
COPB1-208ENST00000532088 LOC102725191A0A1B0GVB3 256 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 EIF4E1BA6NMX2 242 aaKnown RBP11.19□□□□□ -0.62
COPB1-208ENST00000532088 G3V2T6 193 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 KPNA4O00629 521 aaPredicted RBP11.19□□□□□ -0.62
COPB1-208ENST00000532088 CXCL13O43927 109 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 SLC19A2O60779 497 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 VAMP5O95183 116 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 TPOP07202 933 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ANXA8P13928 327 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 GSTM3P21266 225 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ENPP1P22413 925 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 CBLP22681 906 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 GTF2E2P29084 291 aaKnown RBP11.19□□□□□ -0.62
COPB1-208ENST00000532088 GSSP48637 474 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 OR2B6P58173 313 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 LTBQ06643 244 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ZP4Q12836 540 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 COX10Q12887 443 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 TSPAN31Q12999 210 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 PDK3Q15120 406 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 OR7A5Q15622 319 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 SGCBQ16585 318 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
COPB1-208ENST00000532088 C1QL3Q5VWW1 255 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 PGBD2Q6P3X8 592 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 TBPL2Q6SJ96 375 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 TMEM179BQ7Z7N9 219 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 OR5J2Q8NH18 312 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 TUBA1CQ9BQE3 449 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ASPNQ9BXN1 380 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 RNF122Q9H9V4 155 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 RNPEPL1Q9HAU8 725 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 PNPLA3Q9NST1 481 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 C20orf141Q9NUB4 165 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 PDP1Q9P0J1 537 aaPredicted RBP11.19□□□□□ -0.62
COPB1-208ENST00000532088 CLCF1Q9UBD9 225 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 SPTA1P02549 2419 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 ZNF407Q9C0G0 2248 aa11.19□□□□□ -0.62
COPB1-208ENST00000532088 A0A1W2PNV4 684 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 AQP7P3A6NL99 342 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 CLCA1A8K7I4 914 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 EFCAB9A8MZ26 197 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 H0YC42 278 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 CASQ2O14958 399 aaPredicted RBP11.18□□□□□ -0.62
COPB1-208ENST00000532088 PIP5K1CO60331 668 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 C1QL1O75973 258 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 SYNGR4O95473 234 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 BAG2O95816 211 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 CH25HO95992 272 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 HIST1H2ABP04908 130 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 ZNF23P17027 643 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 FUT1P19526 365 aa11.18□□□□□ -0.62
COPB1-208ENST00000532088 ACVR2AP27037 513 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms