RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CLIP4Q8N3C7 705 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 NUDT10Q8NFP7 164 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 OR5W2Q8NH69 310 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 OR10D3Q8NH80 312 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 ROBO4Q8WZ75 1007 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 STARD4Q96DR4 205 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 DNAJA3Q96EY1 480 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 NUDT11Q96G61 164 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 DACH2Q96NX9 599 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CCL19Q99731 98 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 RBM24Q9BX46 236 aaKnown RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 SMURF1Q9HCE7 757 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 GALNT8Q9NY28 637 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 JKAMPQ9P055 326 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CLEC4AQ9UMR7 237 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 LIPT1Q9Y234 373 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 RRP15Q9Y3B9 282 aaKnown RBP6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 CHST2Q9Y4C5 530 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 ATP23Q9Y6H3 246 aa6.22□□□□□ -1.41
TRIM53CP-201ENST00000531490 TRBV5-3A0A0A0MS03 114 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 A0A1W2PP18 115 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SLC22A20A6NK97 555 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 DEFB108AA8MXU0 73 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 FBP2O00757 339 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 AP3D1O14617 1153 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 IL18BPO95998 194 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 PLATP00750 562 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 KNG1P01042 644 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 BCHEP06276 602 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 GKN3PP0CG01 181 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 UBL4AP11441 157 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 IL7RP16871 459 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF17P17021 662 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 RPS4Y1P22090 263 aaKnown RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 IDH2P48735 452 aaKnown RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ATP4BP51164 291 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 CCR4P51679 360 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ARFIP2P53365 341 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 CARD18P57730 90 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 DSTNP60981 165 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SRSF2Q01130 221 aaKnown RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 DBPQ10586 325 aaPredicted RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 CBFBQ13951 182 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SELPLGQ14242 412 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 CAPRIN1Q14444 709 aaKnown RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SQLEQ14534 574 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SF3B4Q15427 424 aaKnown RBP eCLIP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ADRM1Q16186 407 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ACKR1Q16570 336 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SGCBQ16585 318 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 RUNDC3AQ59EK9 446 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SLC25A53Q5H9E4 307 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 METTL21CQ5VZV1 264 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 PRSS57Q6UWY2 283 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 MSANTD1Q6ZTZ1 278 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 P4HA3Q7Z4N8 544 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ADGRG3Q86Y34 549 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 GRAMD2AQ8IUY3 354 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 TMCO5AQ8N6Q1 288 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 METTL25Q8N6Q8 603 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 STPG3Q8N7X2 389 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 FAM71CQ8NEG0 241 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 TOR1AIP2Q8NFQ8 470 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 PIGTQ969N2 578 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 PIK3IP1Q96FE7 263 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 TMEM19Q96HH6 336 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 WFIKKN1Q96NZ8 548 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 LRRC37BQ96QE4 947 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 PIP5K1AQ99755 562 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 SRXN1Q9BYN0 137 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 RNF122Q9H9V4 155 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 POLE3Q9NRF9 147 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 KLHL28Q9NXS3 571 aa6.21□□□□□ -1.41
TRIM53CP-201ENST00000531490 CADP27708 2225 aa6.21□□□□□ -1.42
TRIM53CP-201ENST00000531490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRIM53CP-201ENST00000531490 LOC100653049A0A140TA62 436 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 A0A1W2PNV4 684 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 A8MXE2 369 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 CASKO14936 926 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 TPST1O60507 370 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 GCM2O75603 506 aaPredicted RBP6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 KRT34O76011 436 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 PGM3O95394 542 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 CGAP01215 116 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 PRG2P13727 222 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 GPX2P18283 190 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 CCNA2P20248 432 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 ENPP1P22413 925 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 OPRM1P35372 400 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 EIF1P41567 113 aaKnown RBP6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 ACAA2P42765 397 aaKnown RBP6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 CPA2P48052 419 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 PTH2RP49190 550 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 SUMO3P55854 103 aaPredicted RBP6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 EEFSECP57772 596 aaKnown RBP6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 SIRPAP78324 504 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 HOXC5Q00444 222 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 FAM27E3Q08E93 113 aa6.2□□□□□ -1.42
TRIM53CP-201ENST00000531490 MERTKQ12866 999 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms