RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 HAO1Q9UJM8 370 aa13.93□□□□□ -0.18
COL16A1-216ENST00000529928 LIPT2A6NK58 231 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 B4DSR2 109 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 UQCRC2P22695 453 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 CALCRP30988 508 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 COMPP49747 757 aaPredicted RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ABCE1P61221 599 aaKnown RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ACTG1P63261 375 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 OR7A5Q15622 319 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ADRM1Q16186 407 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 FAM174BQ3ZCQ3 159 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 SAXO2Q658L1 398 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 SPATA21Q7Z572 469 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 CROCCP2Q86T23 111 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 GLCCI1Q86VQ1 547 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ZCCHC24Q8N2G6 241 aaKnown RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 SVOPLQ8N434 492 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ZNF781Q8N8C0 355 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 VPS37AQ8NEZ2 397 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 UBASH3BQ8TF42 649 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ALKBH3Q96Q83 286 aaPredicted RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 CENPHQ9H3R5 247 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 METTL17Q9H7H0 456 aaPredicted RBP13.92□□□□□ -0.18
COL16A1-216ENST00000529928 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 ASIC5Q9NY37 505 aa13.92□□□□□ -0.18
COL16A1-216ENST00000529928 CFAP73A6NFT4 308 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 NR5A2O00482 541 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 VAMP5O95183 116 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 CXCR1P25024 350 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 THBS4P35443 961 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 SELENOPP49908 381 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 WDR4P57081 412 aaKnown RBP13.91□□□□□ -0.18
COL16A1-216ENST00000529928 TUBA1BP68363 451 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 TUBA4AP68366 448 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 EMX2Q04743 252 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 HGFACQ04756 655 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 CCNIQ14094 377 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 GNA13Q14344 377 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 TRIP10Q15642 601 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 GSTA3Q16772 222 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 SMU1Q2TAY7 513 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 TUBA1AQ71U36 451 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 C3orf56Q8N813 242 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 NEURL3Q96EH8 262 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 TAPBPLQ9BX59 468 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 MARCOQ9UEW3 520 aaPredicted RBP13.91□□□□□ -0.18
COL16A1-216ENST00000529928 DYSFO75923 2080 aa13.91□□□□□ -0.18
COL16A1-216ENST00000529928 A0A096LPE4 126 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 PRSS51A0A1B0GVH4 220 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 A0A1W2PPZ6 126 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 SH3PXD2BA1X283 911 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 HMGN4O00479 90 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 SCN2BO60939 215 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 CPSF4O95639 269 aaKnown RBP13.9□□□□□ -0.18
COL16A1-216ENST00000529928 BGNP21810 368 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
COL16A1-216ENST00000529928 LGALS3BPQ08380 585 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 EPS8Q12929 822 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 ANXA8L1Q5VT79 327 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 CREB3L2Q70SY1 520 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 ANKRD46Q86W74 232 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 ZNF418Q8TF45 676 aaPredicted RBP13.9□□□□□ -0.18
COL16A1-216ENST00000529928 CKAP2Q8WWK9 683 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 TLCD1Q96CP7 247 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
COL16A1-216ENST00000529928 LINC00470Q9BZP3 86 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 NELFAQ9H3P2 528 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 SEC61A2Q9H9S3 476 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 KCNK9Q9NPC2 374 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.9□□□□□ -0.18
COL16A1-216ENST00000529928 RAP2CQ9Y3L5 183 aa13.9□□□□□ -0.18
COL16A1-216ENST00000529928 TMEM129A0AVI4 362 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 PRAMEF27A3QJZ7 478 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 ADRA2AP08913 450 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 CBR1P16152 277 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 IL7RP16871 459 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 EGR1P18146 543 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 SLC1A6P48664 564 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 P2RY4P51582 365 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 SLC18A1P54219 525 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 POU3F1Q03052 451 aaPredicted RBP13.89□□□□□ -0.19
COL16A1-216ENST00000529928 BST1Q10588 318 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 MRPL2Q5T653 305 aaKnown RBP13.89□□□□□ -0.19
COL16A1-216ENST00000529928 PRAMEF8Q5VWM4 474 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 PRAMEF7Q5VXH5 474 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 LINGO2Q7L985 606 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 LSRQ86X29 649 aaPredicted RBP13.89□□□□□ -0.19
COL16A1-216ENST00000529928 ZNF440Q8IYI8 595 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 ANKK1Q8NFD2 765 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
COL16A1-216ENST00000529928 SLC35A5Q9BS91 424 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 DPY30Q9C005 99 aa13.89□□□□□ -0.19
COL16A1-216ENST00000529928 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms