RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 WRAP53Q9BUR4 548 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SEC11CQ9BY50 192 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ANGPTL4Q9BY76 406 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 OR51J1Q9H342 316 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ACTL8Q9H568 366 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SFXN1Q9H9B4 322 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ABCB9Q9NP78 766 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MYNNQ9NPC7 610 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SIX2Q9NPC8 291 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 TMEM248Q9NWD8 314 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SOHLH2Q9NX45 425 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 RASL12Q9NYN1 266 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 PLEK2Q9NYT0 353 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GTSE1Q9NYZ3 720 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GSKIPQ9P0R6 139 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 CACNG4Q9UBN1 327 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 DNAJB11Q9UBS4 358 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC9A2Q9UBY0 812 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF629Q9UEG4 869 aaPredicted RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 C3orf18Q9UK00 162 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF222Q9UK12 451 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 DKKL1Q9UK85 242 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MRTO4Q9UKD2 239 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC45A2Q9UMX9 530 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 GABRQQ9UN88 632 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MRPS18BQ9Y676 258 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SPACA6W5XKT8 324 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 MICAL3Q7RTP6 2002 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 SCN7AQ01118 1682 aa3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 DDX60LQ5H9U9 1706 aaKnown RBP3.39□□□□□ -1.87
CLNS1A-209ENST00000527299 COL1A2P08123 1366 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TNS3Q68CZ2 1445 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A087WUJ7 227 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3DA0A087WVF3 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3IA0A087WXS9 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3EA0A087X179 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TRBV11-1A0A0K0K1C0 115 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 A0A0U1RQK1 487 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF320A2RRD8 509 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 LRIT2A6NDA9 550 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF716A6NP11 495 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SERPINE3A8MV23 424 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBC1D3LB9A6J9 549 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MCRIP1C9JLW8 97 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ANHXE9PGG2 379 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NPIPA7E9PJI5 369 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GFYI3L273 518 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TLR4O00206 839 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UPK1AO00322 258 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NR5A2O00482 541 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 BHLHE40O14503 412 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 BCKDKO14874 412 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 FLRT2O43155 660 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC37A4O43826 429 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GMFGO60234 142 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 KIAA0513O60268 411 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 DNAJB6O75190 326 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RDH16O75452 317 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CA11O75493 328 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PRDM1O75626 825 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ATP6AP2O75787 350 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 OR2J2O76002 312 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC25A27O95847 323 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 FADS2O95864 444 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 C1QAP02745 245 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SRPRAP08240 638 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SNRPCP09234 159 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC35G4P0C7Q5 338 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF735P0CB33 412 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GKN3PP0CG01 181 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UBBP0CG47 229 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UBCP0CG48 685 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC35E2BP0CK96 405 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SLC35E2P0CK97 266 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NPIPA8P0DM63 369 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NCF1P14598 390 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 UGT2B7P16662 529 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ZNF7P17097 686 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TBPP20226 339 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 LPOP22079 712 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GLRA1P23415 457 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 KDELR1P24390 212 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MPZP25189 248 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 AZGP1P25311 298 aaKnown RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MST1P26927 711 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CD82P27701 267 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 HTR2AP28223 471 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PTPN6P29350 595 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 TLX1P31314 330 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 CEACAM8P31997 349 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 PSMB10P40306 273 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 NAA10P41227 235 aaPredicted RBP3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 GABRA4P48169 554 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 MTNR1BP49286 362 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 RGS4P49798 205 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 ATP4BP51164 291 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 HCCSP53701 268 aa3.38□□□□□ -1.87
CLNS1A-209ENST00000527299 DLX5P56178 289 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms