RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 OR7D2Q96RA2 312 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 ZNF665Q9H7R5 613 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 EXOSC3Q9NQT5 275 aaKnown RBP9.28□□□□□ -0.92
CTSB-212ENST00000526645 TMEM216Q9P0N5 145 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 CCL27Q9Y4X3 112 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 KCNE3Q9Y6H6 103 aa9.28□□□□□ -0.92
CTSB-212ENST00000526645 VAMP5O95183 116 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 HPXP02790 462 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 GPIP06744 558 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 GUSBP08236 651 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 SNRPAP09012 282 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 IMPDH2P12268 514 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ZFP36P26651 326 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 PGM1P36871 562 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 RPS23P62266 143 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 TUSC1Q2TAM9 212 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 LSM12Q3MHD2 195 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 RNF165Q6ZSG1 346 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 DOK3Q7L591 496 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 CARM1Q86X55 608 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 HOMEZQ8IX15 550 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 CCDC36Q8IYA8 594 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ZIC4Q8N9L1 334 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 DNAJA3Q96EY1 480 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ZNF385AQ96PM9 386 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 GPA33Q99795 319 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 MRPL37Q9BZE1 423 aaKnown RBP9.27□□□□□ -0.93
CTSB-212ENST00000526645 LINC00470Q9BZP3 86 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ZNF350Q9GZX5 532 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 NELFAQ9H3P2 528 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 NOX3Q9HBY0 568 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ATAD3AQ9NVI7 634 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 ATP6V1HQ9UI12 483 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 KCNE5Q9UJ90 142 aa9.27□□□□□ -0.93
CTSB-212ENST00000526645 TMED7-TICAM2A0A0A6YYA0 188 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 A0A1W2PPM1 405 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 DNAJC9-AS1A6NH13 148 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 AQP7P3A6NL99 342 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 NR5A2O00482 541 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 WNT9BO14905 357 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 SCAMP2O15127 329 aaKnown RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 PLPP2O43688 288 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 RP2O75695 350 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 RNASE1P07998 156 aaKnown RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 CELA3BP08861 270 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 EFNA1P20827 205 aaPredicted RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 NR4A1P22736 598 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 COL8A2P25067 703 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 RPL38P63173 70 aaKnown RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 TUBA1BP68363 451 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 TUBA4AP68366 448 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 ARHGAP11BQ3KRB8 267 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 AP1ARQ63HQ0 302 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 SAXO2Q658L1 398 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 KRT80Q6KB66 452 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 FRMD7Q6ZUT3 714 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 TUBA1AQ71U36 451 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 GPAT4Q86UL3 456 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 MYPOPQ86VE0 399 aaPredicted RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 TREML1Q86YW5 311 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 ARFGAP2Q8N6H7 521 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 CCNYL1Q8N7R7 359 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 SIGLECL1Q8N7X8 197 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 OR5D16Q8NGK9 328 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 CLHC1Q8NHS4 586 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 DVL3Q92997 716 aaPredicted RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 SLC25A28Q96A46 364 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 LRRC58Q96CX6 371 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 MMP27Q9H306 513 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 CRLF2Q9HC73 371 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 POLE3Q9NRF9 147 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 EXD2Q9NVH0 621 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 ZNF346Q9UL40 294 aaKnown RBP9.26□□□□□ -0.93
CTSB-212ENST00000526645 TMED7Q9Y3B3 224 aa9.26□□□□□ -0.93
CTSB-212ENST00000526645 A0A096LPE4 126 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 CENPVL1A0A0U1RR11 272 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 A0A1W2PPZ6 126 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 TMEM114B3SHH9 223 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 RPL36A-HNRNPH2H7BZ11 118 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 CLDN34H7C241 214 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 POLR3GO15318 223 aaPredicted RBP9.25□□□□□ -0.93
CTSB-212ENST00000526645 FCMRO60667 390 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 DEAF1O75398 565 aaPredicted RBP9.25□□□□□ -0.93
CTSB-212ENST00000526645 SKAP2O75563 359 aaPredicted RBP9.25□□□□□ -0.93
CTSB-212ENST00000526645 ALX3O95076 343 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 AGR2O95994 175 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 UQCRBP14927 111 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 CCNA2P20248 432 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 RYKP34925 604 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 GLRXP35754 106 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 ROR2Q01974 943 aaKnown RBP9.25□□□□□ -0.93
CTSB-212ENST00000526645 NPRL3Q12980 569 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 TIFABQ6ZNK6 161 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 C16orf62Q7Z3J2 963 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 CNPY4Q8N129 248 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 YIPF5Q969M3 257 aa9.25□□□□□ -0.93
CTSB-212ENST00000526645 PKP2Q99959 881 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 274.8 ms