RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 LIPT2A6NK58 231 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 OR5H1A6NKK0 313 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 HNRNPCL2B2RXH8 293 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SHISA9B4DS77 424 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 HNRNPCL3B7ZW38 293 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 H7C1Q1 480 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RFXANKO14593 260 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 AP3D1O14617 1153 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 HNRNPCL1O60812 293 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RAMP1O60894 148 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 LY6G6DO95868 133 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 CD8AP01732 235 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 GSNP06396 782 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SOD3P08294 240 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 HNRNPCL4P0DMR1 293 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 NR2F1P10589 423 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 TFPIP10646 304 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 IMPDH2P12268 514 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RAC2P15153 192 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 HOXB9P17482 250 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 GGT1P19440 569 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 TACR3P29371 465 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ADSLP30566 484 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RYKP34925 604 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 P2RY4P51582 365 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 POLR2HP52434 150 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 BSPH1Q075Z2 132 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ETFDHQ16134 617 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PGGHGQ32M88 737 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ZNF672Q499Z4 452 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SLC9B1Q4ZJI4 515 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 GPAT3Q53EU6 434 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PRAMEF8Q5VWM4 474 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PRAMEF7Q5VXH5 474 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PAQR6Q6TCH4 344 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 CLEC9AQ6UXN8 241 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 FUNDC1Q8IVP5 155 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PEX5LQ8IYB4 626 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ZNF100Q8IYN0 542 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 CLIP4Q8N3C7 705 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ANKRD42Q8N9B4 389 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 WDR31Q8NA23 367 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ZNF563Q8TA94 476 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PIGXQ8TBF5 258 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SMAP2Q8WU79 429 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 TMEM171Q8WVE6 324 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 GTF2H4Q92759 462 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 TMEM45BQ96B21 275 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 APH1AQ96BI3 265 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ZHX1-C8orf76Q96EF9 292 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 ITCHQ96J02 903 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 Q96MF0 132 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 C7orf26Q96N11 449 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 OR52B2Q96RD2 323 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PAIP2Q9BPZ3 127 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SF3B5Q9BWJ5 86 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RSPO3Q9BXY4 272 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 OR11A1Q9GZK7 315 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SLC52A3Q9NQ40 469 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 RLIMQ9NVW2 624 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 PARPBPQ9NWS1 579 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 NKIRAS1Q9NYS0 192 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 CALML5Q9NZT1 146 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 POLR3KQ9Y2Y1 108 aaPredicted RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 TMED7Q9Y3B3 224 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SLC25A15Q9Y619 301 aa5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 SONP18583 2426 aaKnown RBP5.23□□□□□ -1.57
CCDC90B-204ENST00000525504 UQCRHLA0A096LP55 91 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 TRBV5-3A0A0A0MS03 114 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 ZC3H12DA2A288 527 aaKnown RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 HMGB1P1B2RPK0 211 aaPredicted RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 UBDO15205 165 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 MRPL33O75394 65 aaKnown RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 LYZL6O75951 148 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 HTR3BO95264 441 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 ITGA5P08648 1049 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 FREM3P0C091 2139 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 ETFAP13804 333 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 UQCRBP14927 111 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 IL7RP16871 459 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 PTAFRP25105 342 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 CD40P25942 277 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 POLR2JP52435 117 aaKnown RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 CRISP3P54108 245 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 ATP5J2P56134 94 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 OR2B6P58173 313 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 RPS4XP62701 263 aaKnown RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 HPCAP84074 193 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 PPA1Q15181 289 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 RGNQ15493 299 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 GABRA6Q16445 453 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 GTDC1Q4AE62 458 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 LIN52Q52LA3 116 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 LRIF1Q5T3J3 769 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 MRPL2Q5T653 305 aaKnown RBP5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 AGBL2Q5U5Z8 902 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 RNF220Q5VTB9 566 aa5.22□□□□□ -1.57
CCDC90B-204ENST00000525504 WBP2NLQ6ICG8 309 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms