RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DNAJA4Q8WW22 397 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC38A4Q969I6 547 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TMEM45BQ96B21 275 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TAMM41Q96BW9 452 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 MUCL1Q96DR8 90 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 ARHGDIGQ99819 225 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 ECSITQ9BQ95 431 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TMEM204Q9BSN7 226 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 ESRP2Q9H6T0 727 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 C12orf10Q9HB07 376 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 TAS2R16Q9NYV7 291 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 MALT1Q9UDY8 824 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 RAI1Q7Z5J4 1906 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-205ENST00000525079 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 TRAV36DV7A0A075B6V5 113 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 A0A087WUJ7 227 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 A0A1B0GX12 115 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 BBIP1A8MTZ0 92 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 M0R082 166 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 HS3ST1O14792 307 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 SMPD2O60906 423 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 CD99P14209 185 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 CD247P20963 164 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 GRPRP30550 384 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 SELENOPP49908 381 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF83P51522 516 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 FOXD4Q12950 439 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 NRF1Q16656 503 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 COQ5Q5HYK3 327 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 FAM91A1Q658Y4 838 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 NIPAL3Q6P499 406 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 CALHM3Q86XJ0 350 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC30A8Q8IWU4 369 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 C10orf53Q8N6V4 93 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 WFDC11Q8NEX6 87 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR8J3Q8NGG0 315 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 PIGTQ969N2 578 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 RCN3Q96D15 328 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF587Q96SQ5 575 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 SH3GL1Q99961 368 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 NPAP1Q9NZP6 1156 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 RASD1Q9Y272 281 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
TRAPPC4-205ENST00000525079 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 LRRN3E7EW58 273 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 PDLIM1O00151 329 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR2T1O43869 369 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 KRT33AO76009 404 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 VAMP5O95183 116 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 C8BP07358 591 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 TNFRSF1BP20333 461 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 CRYBA2P53672 197 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 SEC24CP53992 1094 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 CLDN17P56750 224 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 LTBQ06643 244 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 ENTPD8Q5MY95 495 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 FAM69AQ5T7M9 428 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 ADAM5Q6NVV9 412 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 CCDC80Q76M96 950 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 P2RY8Q86VZ1 359 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 PERPQ96FX8 193 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF583Q96ND8 569 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 MUS81Q96NY9 551 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLCO5A1Q9H2Y9 848 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 F8P00451 2351 aa11.29□□□□□ -0.6
TRAPPC4-205ENST00000525079 M0R1B8 84 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 AIM2O14862 343 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 SHOX2O60902 331 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 UPK3AO75631 287 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 NPPAP01160 153 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 BGLAPP02818 100 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 THY1P04216 161 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 COX4I1P13073 169 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 ZNF43P17038 809 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 MPGP29372 298 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 HOXC12P31275 282 aa11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
TRAPPC4-205ENST00000525079 OR7E24Q6IFN5 339 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms