RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 EFNA4P52798 201 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 LARS2Q15031 903 aaKnown RBP16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 SWI5Q1ZZU3 235 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 TBRG1Q3YBR2 411 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 C1QTNF12Q5T7M4 302 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 ATG16L1Q676U5 607 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 OR1K1Q8NGR3 316 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 FAM168AQ92567 244 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 TMEM45AQ9NWC5 275 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 PCDHB14Q9Y5E9 798 aa16.39■□□□□ 0.21
PTP4A3-206ENST00000524028 FTCDNL1E5RQL4 147 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 UBDO15205 165 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 UPK3AO75631 287 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 F12P00748 615 aaPredicted RBP16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC25A16P16260 332 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 NCF2P19878 526 aaPredicted RBP16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC18A1P54219 525 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 VLDLRP98155 873 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 EGR4Q05215 589 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 CHRNB3Q05901 458 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 RGNQ15493 299 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 NIPAL3Q6P499 406 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 KLHL24Q6TFL4 600 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 MSANTD1Q6ZTZ1 278 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 KDM8Q8N371 416 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 GTF2H4Q92759 462 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 BCL2L2Q92843 193 aaPredicted RBP16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 MAL2Q969L2 176 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 ALKBH3Q96Q83 286 aaPredicted RBP16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 PTDSS2Q9BVG9 487 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 PAIP1Q9H074 479 aaKnown RBP16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 RMND5AQ9H871 391 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 SEC14L4Q9UDX3 406 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 ZNF232Q9UNY5 417 aa16.38■□□□□ 0.21
PTP4A3-206ENST00000524028 RTTNQ86VV8 2226 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 NR5A2O00482 541 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 KRT33AO76009 404 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 VAMP5O95183 116 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 MAGOHP61326 146 aaKnown RBP16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 ZSWIM7Q19AV6 140 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 CHRFAM7AQ494W8 412 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 ZNF311Q5JNZ3 666 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 C6orf10Q5SRN2 563 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 PRAMEF8Q5VWM4 474 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 PRAMEF7Q5VXH5 474 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 PODNL1Q6PEZ8 512 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC2A7Q6PXP3 512 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 ABHD12BQ7Z5M8 362 aaPredicted RBP16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 STK35Q8TDR2 534 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC25A36Q96CQ1 311 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 FBXO17Q96EF6 278 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC38A2Q96QD8 506 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 NELFAQ9H3P2 528 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 OBP2BQ9NPH6 170 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 RASD1Q9Y272 281 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 IFT52Q9Y366 437 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 PMF1-BGLAPU3KQ54 211 aa16.37■□□□□ 0.21
PTP4A3-206ENST00000524028 A0A096LPE4 126 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 A0A096LPI6 279 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 A0A1W2PPZ6 126 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 ZNF587BE7ETH6 402 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 ZNF500O60304 480 aaPredicted RBP16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 PNMTP11086 282 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 BMP4P12644 408 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 RPS5P46782 204 aaKnown RBP16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 TUBA1BP68363 451 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 TUBA4AP68366 448 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 MIER2Q8N344 545 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 MFSD8Q8NHS3 518 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 PROX1Q92786 737 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 KTI12Q96EK9 354 aaPredicted RBP16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 SORCS2Q96PQ0 1159 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 BCL2L10Q9HD36 194 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 A4GALTQ9NPC4 353 aa16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
PTP4A3-206ENST00000524028 ARPC4-TTLL3A0A0A6YYG9 625 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 RNF212BA8MTL3 300 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 CLIC1O00299 241 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 AHSA1O95433 338 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 IFNA2P01563 188 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 IGHV4-31P0DP07 118 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 BMP2P12643 396 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 ANKRD16Q6P6B7 361 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 COMTD1Q86VU5 262 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 C10orf111Q8N326 155 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 LINC00470Q9BZP3 86 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 ARMC7Q9H6L4 198 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 SEC61A2Q9H9S3 476 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 NKIRAS1Q9NYS0 192 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 SLC25A37Q9NYZ2 338 aa16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 CRNNQ9UBG3 495 aaPredicted RBP16.35■□□□□ 0.21
PTP4A3-206ENST00000524028 TMEM247A6NEH6 219 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 VWC2LB2RUY7 222 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 ZNF432O94892 652 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CECR9P0C854 216 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 USF1P22415 310 aaPredicted RBP16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CALCRP30988 508 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms