RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 B3GALT5Q9Y2C3 310 aa11.15□□□□□ -0.62
HDAC2-211ENST00000521233 MED31Q9Y3C7 131 aa11.15□□□□□ -0.62
HDAC2-211ENST00000521233 INTS1Q8N201 2190 aaKnown RBP11.15□□□□□ -0.62
HDAC2-211ENST00000521233 MPDZO75970 2070 aa11.15□□□□□ -0.63
HDAC2-211ENST00000521233 ACOT8O14734 319 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 GSC2O15499 205 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 AKR7A3O95154 331 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 KIR2DL2P43627 348 aaPredicted RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 VLDLRP98155 873 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 FAM98BQ52LJ0 330 aaKnown RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 WDR88Q6ZMY6 472 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 GALNT5Q7Z7M9 940 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 PIK3C3Q8NEB9 887 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 TMEM239Q8WW34 195 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 TAAR8Q969N4 342 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 SLC25A36Q96CQ1 311 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 PSMG3-AS1Q96PY0 264 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF347Q96SE7 839 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 PIP5K1AQ99755 562 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 PRSS27Q9BQR3 290 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 FKRPQ9H9S5 495 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 IL1RAPQ9NPH3 570 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 KRCC1Q9NPI7 259 aaPredicted RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 NDUFAF4Q9P032 175 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 CLEC4AQ9UMR7 237 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
HDAC2-211ENST00000521233 ANKHD1Q8IWZ3 2542 aaKnown RBP11.14□□□□□ -0.63
HDAC2-211ENST00000521233 HECTD1Q9ULT8 2610 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 A0A1W2PRQ8 180 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TCRBV5S2A0A599 114 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 A1L4Q6 167 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ENO4A6NNW6 628 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF716A6NP11 495 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 PRSS44E7EML9 344 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 hCG_2039718K7EN88 272 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 M0R082 166 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 KPNA4O00629 521 aaPredicted RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 AKAP8O43823 692 aaKnown RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 SMNDC1O75940 238 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 PRSS23O95084 383 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 BGLAPP02818 100 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 MT-ND1P03886 318 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 GRPRP30550 384 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 YAP1P46937 504 aaKnown RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 PCYT1AP49585 367 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 MS4A2Q01362 244 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 DGCR6Q14129 220 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 POU4F3Q15319 338 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF74Q16587 644 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 FGD3Q5JSP0 725 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TMEM225Q6GV28 225 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 H1FNTQ75WM6 255 aaPredicted RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 LIX1LQ8IVB5 337 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZDHHC21Q8IVQ6 265 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 NKAIN4Q8IVV8 208 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TUSC5Q8IXB3 177 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 RNF113BQ8IZP6 322 aaKnown RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF417Q8TAU3 575 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 RNASE6Q93091 150 aaKnown RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 STARD4Q96DR4 205 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF587Q96SQ5 575 aaPredicted RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 NMNAT1Q9HAN9 279 aaPredicted RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 NANSQ9NR45 359 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 MAN2C1Q9NTJ4 1040 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 PARPBPQ9NWS1 579 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 MRPL39Q9NYK5 338 aaKnown RBP11.13□□□□□ -0.63
HDAC2-211ENST00000521233 JKAMPQ9P055 326 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 SLC7A8Q9UHI5 535 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF229Q9UJW7 825 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 TMEM5Q9Y2B1 443 aa11.13□□□□□ -0.63
HDAC2-211ENST00000521233 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 DHRS12A0PJE2 317 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 NKX2-6A6NCS4 301 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 J3KTA2 159 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 FFAR1O14842 300 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 CIB2O75838 187 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 CLDN1O95832 211 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 HIST1H2ABP04908 130 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 RAP2AP10114 183 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 UMPSP11172 480 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 PTNP21246 168 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 MAGEA2P43356 314 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 UGT2B15P54855 530 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 SORDQ00796 357 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 SPIBQ01892 262 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 PMS2P3Q13401 168 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 CDSNQ15517 529 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 ZNF730Q6ZMV8 503 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 HIST3H2AQ7L7L0 130 aa11.12□□□□□ -0.63
HDAC2-211ENST00000521233 RRM2BQ7LG56 351 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms