RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, human

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIO-223	ENST00000515710	HRH3	Q9Y5N1	445 aa		18.21	■□□□□ 0.51
TRIO-223	ENST00000515710	CEACAM1	P13688	526 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	PCSK6	P29122	969 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	ATP6V1E1	P36543	226 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	TGFBR2	P37173	567 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	LIPA	P38571	399 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	ERVK-25	P63136	954 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	RPL18	Q07020	188 aa	Known RBP	18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	FOXF1	Q12946	379 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	C1D	Q13901	141 aa	Known RBP	18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	MFSD13A	Q14CX5	517 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	SPHAR	Q15513	63 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	SGCB	Q16585	318 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	KLHL12	Q53G59	568 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	EMC4	Q5J8M3	183 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	PRAMEF20	Q5VT98	475 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	GPALPP1	Q8IXQ4	340 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	IL22RA1	Q8N6P7	574 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	OR5J2	Q8NH18	312 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	OR4K13	Q8NH42	304 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	TEAD3	Q99594	435 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	JAM3	Q9BX67	310 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	HCAR1	Q9BXC0	346 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	POTEKP	Q9BYX7	375 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	SERINC1	Q9NRX5	453 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	ADAM18	Q9Y3Q7	739 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	MRPS18B	Q9Y676	258 aa	Known RBP	18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	OTOGL	Q3ZCN5	2332 aa		18.2	■□□□□ 0.5
TRIO-223	ENST00000515710	TMEM129	A0AVI4	362 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	CDRT15L2	A8MXV6	281 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	TXNDC12	O95881	172 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	CCL3	P10147	92 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC2A5	P22732	501 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	ETV1	P50549	477 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	DCTN2	Q13561	401 aa	Known RBP	18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	ATP1A4	Q13733	1029 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC25A36	Q96CQ1	311 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	C1GALT1C1	Q96EU7	318 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	OR51V1	Q9H2C8	321 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	KLHL1	Q9NR64	748 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	HAO2	Q9NYQ3	351 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	TNFRSF10D	Q9UBN6	386 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710		A0A087WZY1	265 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	CCDC182	A6NF36	153 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SNX4	O95219	450 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	IGHA1	P01876	353 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	ADH6	P28332	368 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SDHA	P31040	664 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	CTF1	Q16619	201 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	ACER2	Q5QJU3	275 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	GPR139	Q6DWJ6	353 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	FAM122B	Q7Z309	247 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	DTX1	Q86Y01	620 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SIRT6	Q8N6T7	355 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	CYB561A3	Q8NBI2	242 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	SDR9C7	Q8NEX9	313 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	MFSD8	Q8NHS3	518 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	DDO	Q99489	341 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	NPAS1	Q99742	590 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	ASPN	Q9BXN1	380 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	FBXL2	Q9UKC9	423 aa		18.19	■□□□□ 0.5
TRIO-223	ENST00000515710	PROB1	E7EW31	1015 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	TM4SF5	O14894	197 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	DXO	O77932	396 aa	Known RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	APOL3	O95236	402 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	HSMCR30	P0CW71	290 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	FKBP2	P26885	142 aa	Known RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	EIF1	P41567	113 aa	Known RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	RGS6	P49758	472 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	RPS7	P62081	194 aa	Known RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	LGALS3BP	Q08380	585 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	INPP5J	Q15735	1006 aa	Predicted RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	ZNF554	Q86TJ5	538 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	NPEPL1	Q8NDH3	523 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	OR4F15	Q8NGB8	312 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	POC1B	Q8TC44	478 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	PSMF1	Q92530	271 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	THOC3	Q96J01	351 aa	Known RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	OR11A1	Q9GZK7	315 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	PROK2	Q9HC23	129 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	TAS2R5	Q9NYW4	299 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	CORIN	Q9Y5Q5	1042 aa		18.18	■□□□□ 0.5
TRIO-223	ENST00000515710	SPIN1	Q9Y657	262 aa	Predicted RBP	18.18	■□□□□ 0.5
TRIO-223	ENST00000515710		J3QRE1	110 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	SNPH	O15079	494 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	SCG5	P05408	212 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	POU4F2	Q12837	409 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	B3GNTL1	Q67FW5	361 aa	Predicted RBP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	IGF2-AS	Q6U949	168 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	SHF	Q7M4L6	423 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	CROCCP3	Q8IVE0	287 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	OR51G2	Q8NGK0	314 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	KISS1R	Q969F8	398 aa	Predicted RBP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	ZBTB8A	Q96BR9	441 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	TMEM41A	Q96HV5	264 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710		Q96M85	177 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	ISYNA1	Q9NPH2	558 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	MRPL39	Q9NYK5	338 aa	Known RBP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	GRHPR	Q9UBQ7	328 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	IL17B	Q9UHF5	180 aa		18.17	■□□□□ 0.5

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