RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 VWA1Q6PCB0 445 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 PRSS57Q6UWY2 283 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 CACUL1Q86Y37 369 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 NPAS3Q8IXF0 933 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 OR52M1Q8NGK5 317 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF480Q8WV37 535 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 DTD2Q96FN9 168 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 CNPPD1Q9BV87 410 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SGK2Q9HBY8 427 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 SAMD4AQ9UPU9 718 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 PCYT1BQ9Y5K3 369 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 RANBP2P49792 3224 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-219ENST00000514743 ANXA2P2A6NMY6 339 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 QSOX1O00391 747 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 C1orf105O95561 183 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 PEPDP12955 493 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 HSD3B1P14060 373 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 IDSP22304 550 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 STOMP27105 288 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 EPHA2P29317 976 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 RGS6P49758 472 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 IDH3GP51553 393 aaPredicted RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 TDGF1P3P51864 188 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 MVDP53602 400 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 DUSP8Q13202 625 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 TDGQ13569 410 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 GXYLT1Q4G148 440 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 SYTL3Q4VX76 610 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF385BQ569K4 471 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 OR52W1Q6IF63 320 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM220Q6QAJ8 160 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 SLCO4C1Q6ZQN7 724 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 LANCL3Q6ZV70 420 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 CBLL1Q75N03 491 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 SSX7Q7RTT5 188 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 GRASPQ7Z6J2 395 aaPredicted RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 TSEN54Q7Z6J9 526 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF547Q8IVP9 402 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 UXS1Q8NBZ7 420 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 BEST4Q8NFU0 473 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 OR4C15Q8NGM1 316 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM159Q96B96 161 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF479Q96JC4 524 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 WRAP53Q9BUR4 548 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 SNHG12Q9BXW3 62 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 MCOLN1Q9GZU1 580 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 POFUT1Q9H488 388 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 FZD3Q9NPG1 666 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 RAD18Q9NS91 495 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 FBXO34Q9NWN3 711 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 YARS2Q9Y2Z4 477 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 INSL6Q9Y581 213 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 PCDHB11Q9Y5F2 797 aa6.9□□□□□ -1.31
PDLIM5-219ENST00000514743 OTOL1A6NHN0 477 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 INMT-MINDY4F8WBC2 141 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SOCS6O14544 535 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TP53I11O14683 189 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2J2O76002 312 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 F10P00742 488 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PPBPP02775 128 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 F13BP05160 661 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 POU3F2P20265 443 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 KDELR2P33947 212 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 GDNFP39905 211 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 DGKGP49619 791 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 TBPL1P62380 186 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 E2F1Q01094 437 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 P4HA3Q7Z4N8 544 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SFTPA1Q8IWL2 248 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ETFBKMTQ8IXQ9 262 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 BEND2Q8NDZ0 799 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ARRDC3Q96B67 414 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 WDR34Q96EX3 536 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 MS4A4EQ96PG1 132 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ZFYVE21Q9BQ24 234 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 DPEP2Q9H4A9 486 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CACYBPQ9HB71 228 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2W5A6NFC9 320 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PEX12O00623 359 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC28A2O43868 658 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 IGHV2-5P01817 119 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CATP04040 527 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CLEC3BP05452 202 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 NPPBP16860 134 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 GADD45AP24522 165 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CTSKP43235 329 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 CLDN20P56880 219 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 RPS13P62277 151 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ACSM2AQ08AH3 577 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 PRSS53Q2L4Q9 553 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF697Q5TEC3 545 aa6.89□□□□□ -1.31
PDLIM5-219ENST00000514743 ACSM2BQ68CK6 577 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms