RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ZNF587BE7ETH6 402 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 NR5A2O00482 541 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 UPK3AO75631 287 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 KRT33AO76009 404 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 ANP32DO95626 131 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 F12P00748 615 aaPredicted RBP10.64□□□□□ -0.71
SNHG4-208ENST00000514110 NUDT7P0C024 238 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 ZCCHC18P0CG32 403 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 IGHV4-31P0DP07 118 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 BMP4P12644 408 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 COPZ1P61923 177 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 HOXC5Q00444 222 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 LARS2Q15031 903 aaKnown RBP10.64□□□□□ -0.71
SNHG4-208ENST00000514110 PRAMEF8Q5VWM4 474 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 PRAMEF7Q5VXH5 474 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 CYB5R2Q6BCY4 276 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 ABHD12BQ7Z5M8 362 aaPredicted RBP10.64□□□□□ -0.71
SNHG4-208ENST00000514110 EPHX4Q8IUS5 362 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 OR9I1Q8NGQ6 314 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 PROX1Q92786 737 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 BCL2L2Q92843 193 aaPredicted RBP10.64□□□□□ -0.71
SNHG4-208ENST00000514110 TMEM19Q96HH6 336 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 MAELQ96JY0 434 aaKnown RBP10.64□□□□□ -0.71
SNHG4-208ENST00000514110 SORCS2Q96PQ0 1159 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 SLC38A2Q96QD8 506 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 OR52B2Q96RD2 323 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 SPATA9Q9BWV2 254 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
SNHG4-208ENST00000514110 A0A096LPE4 126 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 A0A0G2JPF8 293 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 A0A1W2PPZ6 126 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 HNRNPCL2B2RXH8 293 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 HNRNPCL3B7ZW38 293 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 FTCDNL1E5RQL4 147 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 SLCO1B7G3V0H7 640 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 HNRNPCL1O60812 293 aaKnown RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 VAMP5O95183 116 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 CSF3P09919 207 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 FAM157CP0CG43 387 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 HNRNPCL4P0DMR1 293 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ZNF16P17020 682 aaPredicted RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 POLR2JP52435 117 aaKnown RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 TUBA1BP68363 451 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 TUBA4AP68366 448 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 EGR4Q05215 589 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ZSWIM7Q19AV6 140 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ATG16L1Q676U5 607 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 MSANTD1Q6ZTZ1 278 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 TUBA1AQ71U36 451 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 CROCCP2Q86T23 111 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 KDM8Q8N371 416 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 STK35Q8TDR2 534 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 MAL2Q969L2 176 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 SLC25A36Q96CQ1 311 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ITCHQ96J02 903 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 RSPO3Q9BXY4 272 aaPredicted RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 NELFAQ9H3P2 528 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 RMND5AQ9H871 391 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 SEC61A2Q9H9S3 476 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 OBP2BQ9NPH6 170 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 SDR39U1Q9NRG7 319 aaPredicted RBP10.63□□□□□ -0.71
SNHG4-208ENST00000514110 CA10Q9NS85 328 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 TMEM160Q9NX00 188 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ZIM2Q9NZV7 527 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 SEC14L4Q9UDX3 406 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 CDC42EP3Q9UKI2 254 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 ZNF232Q9UNY5 417 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 RASD1Q9Y272 281 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 PCDHB14Q9Y5E9 798 aa10.63□□□□□ -0.71
SNHG4-208ENST00000514110 A0A096LPI6 279 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 ARPC4-TTLL3A0A0A6YYG9 625 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 UBDO15205 165 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 PHF1O43189 567 aaPredicted RBP10.62□□□□□ -0.71
SNHG4-208ENST00000514110 AHSA1O95433 338 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 CECR9P0C854 216 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 PNMTP11086 282 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 CALCRP30988 508 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 SERPINF1P36955 418 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 RPS5P46782 204 aaKnown RBP10.62□□□□□ -0.71
SNHG4-208ENST00000514110 PDLIM4P50479 330 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 CLDN17P56750 224 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNHG4-208ENST00000514110 GGTLC2Q14390 218 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 RGNQ15493 299 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 ZNF311Q5JNZ3 666 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 C6orf10Q5SRN2 563 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 ANKRD16Q6P6B7 361 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 MYPOPQ86VE0 399 aaPredicted RBP10.62□□□□□ -0.71
SNHG4-208ENST00000514110 ARIH2OSQ8N7S6 290 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 ANKS4BQ8N8V4 417 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 MFSD8Q8NHS3 518 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 MAGEE2Q8TD90 523 aaPredicted RBP10.62□□□□□ -0.71
SNHG4-208ENST00000514110 TMEM158Q8WZ71 300 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 KATNB1Q9BVA0 655 aa10.62□□□□□ -0.71
SNHG4-208ENST00000514110 BEX2Q9BXY8 128 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms