RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DCAF12Q5T6F0 453 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 FAM69AQ5T7M9 428 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ZFP41Q8N8Y5 198 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 IMMP1LQ96LU5 166 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 Q96M85 177 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 TBX5Q99593 518 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 COQ7Q99807 217 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ISG20L2Q9H9L3 353 aaKnown RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 GALNT9Q9HCQ5 603 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 TOR4AQ9NXH8 423 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 LOXL2Q9Y4K0 774 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 R4GN57 208 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 A0A1W2PQ72 361 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 PRKCAP17252 672 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 SPI1P17947 270 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 RPS19P39019 145 aaKnown RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 PTGDSP41222 190 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 CAPZA2P47755 286 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 DIO1P49895 249 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 SLC25A1P53007 311 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ZNF85Q03923 595 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 PON3Q15166 354 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 EXT1Q16394 746 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 C1QL3Q5VWW1 255 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 VASNQ6EMK4 673 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 C16orf87Q6PH81 154 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 MAMDC2Q7Z304 686 aaPredicted RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 KLBQ86Z14 1044 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 GPALPP1Q8IXQ4 340 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 LSM14AQ8ND56 463 aaKnown RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 ATP6V1C2Q8NEY4 427 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ZPLD1Q8TCW7 415 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 TMEM203Q969S6 136 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ZMYND19Q96E35 227 aaPredicted RBP13.55□□□□□ -0.24
VCAN-211ENST00000513984 RASL10BQ96S79 203 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 ASB6Q9NWX5 421 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 BABAM2Q9NXR7 383 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 NOX1Q9Y5S8 564 aa13.55□□□□□ -0.24
VCAN-211ENST00000513984 A0A075B6Q4 140 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 IGLV3-32A0A0A0MS00 114 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 TRDV1A0A1B0GX56 115 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 ETV2O00321 342 aaPredicted RBP13.54□□□□□ -0.24
VCAN-211ENST00000513984 CBFA2T3O75081 653 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 IL1AP01583 271 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 GAAP10253 952 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 CELP19835 753 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 MSX1P28360 303 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 CDKN2AP42771 156 aaKnown RBP13.54□□□□□ -0.24
VCAN-211ENST00000513984 FABP5Q01469 135 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 INAQ16352 499 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 SGCBQ16585 318 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.54□□□□□ -0.242e-7■■■■■ 32.6
VCAN-211ENST00000513984 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 GPR139Q6DWJ6 353 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 LEG1Q6P5S2 330 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 JAZF1Q86VZ6 243 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 NAXDQ8IW45 347 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 ARIH2OSQ8N7S6 290 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 SPACA9Q96E40 222 aaPredicted RBP13.54□□□□□ -0.24
VCAN-211ENST00000513984 C1GALT1C1Q96EU7 318 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 CNN2Q99439 309 aaKnown RBP13.54□□□□□ -0.24
VCAN-211ENST00000513984 TM9SF2Q99805 663 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 ZPBPQ9BS86 351 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 C6orf62Q9GZU0 229 aaPredicted RBP13.54□□□□□ -0.24
VCAN-211ENST00000513984 TRIM36Q9NQ86 728 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 KLRF1Q9NZS2 232 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 SDK2Q58EX2 2172 aa13.54□□□□□ -0.24
VCAN-211ENST00000513984 A0A1W2PQL4 384 aaPredicted RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 C2orf72A6NCS6 295 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 LRRTM2O43300 516 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 STK17BO94768 372 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 TFP02787 698 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 MT-ND5P03915 603 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 F13BP05160 661 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 CD63P08962 238 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR2T7P0C7T2 308 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 GALP22466 123 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 FOLR3P41439 243 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 CRTC2Q53ET0 693 aaPredicted RBP13.53□□□□□ -0.24
VCAN-211ENST00000513984 BICRALQ6AI39 1079 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR5M10Q6IEU7 315 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 BTLAQ7Z6A9 289 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR10G3Q8NGC4 313 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR5J2Q8NH18 312 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 M1APQ8TC57 530 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 FNDC8Q8TC99 324 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 ZNRF4Q8WWF5 429 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
VCAN-211ENST00000513984 TSPAN32Q96QS1 320 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms