RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SERPINA1P01009 418 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 ELANEP08246 267 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HIST1H2AGP0C0S8 130 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF12P17014 697 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 PRLHRP49683 370 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 EFNB2P52799 333 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 CRYBA4P53673 196 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZP1P60852 638 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 OGDHQ02218 1023 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 CKAP4Q07065 602 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 MAD2L1BPQ15013 274 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 NECTIN1Q15223 517 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 CHRFAM7AQ494W8 412 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 TIMM23BQ5SRD1 257 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 CCNJQ5T5M9 372 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 C22orf42Q6IC83 251 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 RTL6Q6ICC9 239 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 SV2AQ7L0J3 742 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 NRMQ8IXM6 262 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 PUSL1Q8N0Z8 303 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 STK40Q8N2I9 435 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 C12orf76Q8N812 135 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 LRTM2Q8N967 370 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 NOXO1Q8NFA2 376 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR4F6Q8NGB9 312 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR11H4Q8NGC9 324 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 RND1Q92730 232 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HIST1H2ACQ93077 130 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 NEIL2Q969S2 332 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 YIPF6Q96EC8 236 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 FAM46AQ96IP4 442 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 NSMCE3Q96MG7 304 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 WFIKKN1Q96NZ8 548 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 EPYCQ99645 322 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 ATP5SQ99766 215 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 MICU1Q9BPX6 476 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HCAR1Q9BXC0 346 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HOXD1Q9GZZ0 328 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 KIR3DX1Q9H7L2 352 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 RNF146Q9NTX7 359 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 STOML2Q9UJZ1 356 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 HS3ST3A1Q9Y663 406 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 ANKRD31Q8N7Z5 1873 aa5.6□□□□□ -1.51
TRAPPC11-209ENST00000512476 A0A1B0GVG6 124 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 A0A1B0GVI7 797 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 PDHXO00330 501 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 MAGEB4O15481 346 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 NOS1APO75052 506 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 HSPD1P10809 573 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ANXA3P12429 323 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 S100A7P31151 101 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 HGFACQ04756 655 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FCHO2Q0JRZ9 810 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CCDC58Q4VC31 144 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ANKRD26P1Q6NSI1 321 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 KIRREL2Q6UWL6 708 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CCNI2Q6ZMN8 369 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 DCDC5Q6ZRR9 648 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 LINC00336Q6ZUF6 198 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 TPRG1Q6ZUI0 275 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CLNKQ7Z7G1 428 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FBXO16Q8IX29 292 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 OR2AK2Q8NG84 335 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CDS1Q92903 461 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 PTH2Q96A98 100 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 LGMNQ99538 433 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ECSITQ9BQ95 431 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ULBP1Q9BZM6 244 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZNF430Q9H8G1 570 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FBXO8Q9NRD0 319 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 AGPAT4Q9NRZ5 378 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 C1orf109Q9NX04 203 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 NYAP2Q9P242 653 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 PDE10AQ9Y233 779 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FADS3Q9Y5Q0 445 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 HEMK1Q9Y5R4 338 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 DOCK2Q92608 1830 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 TRAV24A0A0B4J272 114 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 B8ZZF3 427 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 TMEM150CB9EJG8 249 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 MSI1O43347 362 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ZMPSTE24O75844 475 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 FARS2O95363 451 aaKnown RBP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 SNAP29O95721 258 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 GPX3P22352 226 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CRABP1P29762 137 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 CRYBB2P43320 205 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 GYG1P46976 350 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 LIMS1P48059 325 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 XGP55808 180 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ERVK-8P63133 956 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 OCA2Q04671 838 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ILF3Q12906 894 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 MYBPHQ13203 477 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 HLA-BQ31612 363 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 VPS26BQ4G0F5 336 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 ARMCX4Q5H9R4 360 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 GCSAMLQ5JQS6 135 aa5.59□□□□□ -1.51
TRAPPC11-209ENST00000512476 IDNKQ5T6J7 187 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms