RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CCDC103Q8IW40 242 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 UBQLNLQ8IYU4 475 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 RNF113BQ8IZP6 322 aaKnown RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ACBD4Q8NC06 268 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 OR9Q2Q8NGE9 314 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 OR52J3Q8NH60 311 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ABHD3Q8WU67 409 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 LRTOMTQ8WZ04 291 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 OSTF1Q92882 214 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 DNAJA3Q96EY1 480 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF347Q96SE7 839 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 EPYCQ99645 322 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 PKP2Q99959 881 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 NIPSNAP1Q9BPW8 284 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 VKORC1Q9BQB6 163 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 FKRPQ9H9S5 495 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CALHM2Q9HA72 323 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 S100A14Q9HCY8 104 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 JKAMPQ9P055 326 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 DNAJB9Q9UBS3 223 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ERRFI1Q9UJM3 462 aaPredicted RBP4.4□□□□□ -1.7
LMNB1-208ENST00000504788 AURKCQ9UQB9 309 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 SIGLEC7Q9Y286 467 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 HIF3AQ9Y2N7 669 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 MEMO1Q9Y316 297 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF175Q9Y473 711 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 U3KQV3 271 aa4.4□□□□□ -1.7
LMNB1-208ENST00000504788 CSMD1Q96PZ7 3565 aa4.4□□□□□ -1.71
LMNB1-208ENST00000504788 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.71
LMNB1-208ENST00000504788 TRAV36DV7A0A075B6V5 113 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 IGHV3-15A0A0B4J1V0 119 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 A0A0G2JNJ9 132 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HTR3EA5X5Y0 456 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ELOA3DA6NLF2 546 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PYCARD-AS1I3L0S3 204 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 M0R082 166 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PLPP3O14495 311 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CLOCKO15516 846 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 AKR7A3O95154 331 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 RCBTB2O95199 551 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MT-ATP6P00846 226 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CST1P01037 141 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GABRA1P14867 456 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CXCR1P25024 350 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 EPHA2P29317 976 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GRPRP30550 384 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OPRM1P35372 400 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PTGER4P35408 488 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 IDUAP35475 653 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NUP107P57740 925 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TFF3Q07654 80 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZP4Q12836 540 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GK3PQ14409 553 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PDK3Q15120 406 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SGCBQ16585 318 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MICAQ29983 383 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.39□□□□□ -1.712e-7■□□□□ 9.8
LMNB1-208ENST00000504788 ELOA3BQ3SY89 546 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 C1orf185Q5T7R7 199 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 KDM4DQ6B0I6 523 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HBMQ6B0K9 141 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CD300LDQ6UXZ3 194 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 LIX1LQ8IVB5 337 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PM20D2Q8IYS1 436 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SCAIQ8N9R8 606 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 RELL2Q8NC24 303 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ELOA3Q8NG57 546 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR8D4Q8NGM9 314 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF417Q8TAU3 575 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ROBO4Q8WZ75 1007 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CPNE4Q96A23 557 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DDIT4LQ96D03 193 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NMD3Q96D46 503 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 BPIFA2Q96DR5 249 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NRBF2Q96F24 287 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 CCDC120Q96HB5 630 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 LRGUKQ96M69 825 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 HS6ST2Q96MM7 605 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ALPK1Q96QP1 1244 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 OR5B2Q96R09 309 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GPX7Q96SL4 187 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF587Q96SQ5 575 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DDOQ99489 341 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SLC29A1Q99808 456 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 FNDC11Q9BVV2 318 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 DGCR6LQ9BY27 220 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 PLA2G12AQ9BZM1 189 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 GABARAPL1Q9H0R8 117 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 TP63Q9H3D4 680 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 LDAHQ9H6V9 325 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MCCC2Q9HCC0 563 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SERINC1Q9NRX5 453 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 MRPL39Q9NYK5 338 aaKnown RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 IL20Q9NYY1 176 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SELENONQ9NZV5 590 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 NKX1-2Q9UD57 310 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-208ENST00000504788 Q9UFV3 132 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 ZNF229Q9UJW7 825 aa4.39□□□□□ -1.71
LMNB1-208ENST00000504788 SLC13A4Q9UKG4 626 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms