RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 A0A1W2PRQ8 180 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 TCRBV3S1A0A5B6 114 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 AQP7P3A6NL99 342 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF814B7Z6K7 855 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 DVL2O14641 736 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 MT-ATP6P00846 226 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 BGLAPP02818 100 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 MT-ND1P03886 318 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 H1F0P07305 194 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 RNF224P0DH78 156 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 KLK2P20151 261 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 FUT4P22083 530 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 KIR2DL2P43627 348 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 SLC16A1P53985 500 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 SMIM11AP58511 58 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 LTBQ06643 244 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 DGCR6Q14129 220 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ABLIM2Q6H8Q1 611 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 FAM214BQ7L5A3 538 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 LIX1LQ8IVB5 337 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 MCEMP1Q8IX19 187 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ADGRG5Q8IZF4 528 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 RNF113BQ8IZP6 322 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 GCNT2Q8N0V5 402 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 TMEM99Q8N816 258 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 CA5BP1Q8WTZ4 195 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ABHD3Q8WU67 409 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 TMEM255BQ8WV15 326 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 CANT1Q8WVQ1 401 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ACOT11Q8WXI4 607 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 SLC25A36Q96CQ1 311 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 TACO1Q9BSH4 297 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 KLHL4Q9C0H6 718 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 BCO1Q9HAY6 547 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 MEPEQ9NQ76 525 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 RHCGQ9UBD6 479 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 ING1Q9UK53 422 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 B3GALT5Q9Y2C3 310 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 MED31Q9Y3C7 131 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 CORINQ9Y5Q5 1042 aa10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 HEATR1Q9H583 2144 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 USP9YO00507 2555 aaPredicted RBP10.61□□□□□ -0.71
PDLIM5-208ENST00000504489 PKDREJQ9NTG1 2253 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 DHRS12A0PJE2 317 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF716A6NP11 495 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 GPR171O14626 319 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 TNFSF13O75888 250 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 DIRAS1O95057 198 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 AKR7A3O95154 331 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 VAMP5O95183 116 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 CLDN14O95500 239 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 YES1P07947 543 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 RAP2AP10114 183 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PTNP21246 168 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 GRPRP30550 384 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 P2RY4P51582 365 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 UGT2B15P54855 530 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 CTBP2P56545 445 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 CDSNQ15517 529 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 ZNF74Q16587 644 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 SLC25A35Q3KQZ1 300 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 OTUD3Q5T2D3 398 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 H1FNTQ75WM6 255 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 MAMDC2Q7Z304 686 aaPredicted RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 SPATA24Q86W54 205 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 CCDC103Q8IW40 242 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 SCAIQ8N9R8 606 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 ADPRHL1Q8NDY3 354 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 OR6K3Q8NGY3 331 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 SLC7A13Q8TCU3 470 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 UTP4Q969X6 686 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 STARD4Q96DR4 205 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 MOGAT1Q96PD6 335 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PSD2Q9BQI7 771 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 SF3B5Q9BWJ5 86 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 FKRPQ9H9S5 495 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 CHST11Q9NPF2 352 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 MRPL39Q9NYK5 338 aaKnown RBP10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 KLHL13Q9P2N7 655 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 RASD1Q9Y272 281 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PRR14LQ5THK1 2151 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 COL12A1Q99715 3063 aa10.6□□□□□ -0.71
PDLIM5-208ENST00000504489 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 A0A087WUU8 490 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 LOC102725191A0A1B0GVB3 256 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 M0R082 166 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 RAMP1O60894 148 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 CIB2O75838 187 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 KRT36O76013 467 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 GADD45GO95257 159 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 CH25HO95992 272 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 BMP5P22003 454 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 GTF2E2P29084 291 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 AGTR1P30556 359 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 HMGA2P52926 109 aa10.59□□□□□ -0.71
PDLIM5-208ENST00000504489 PRKCDQ05655 676 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms