RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ODF3L2Q3SX64 289 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MIDNQ504T8 468 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 IDNKQ5T6J7 187 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 PXDC1Q5TGL8 231 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR4A47Q6IF82 309 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 FAHD1Q6P587 224 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 DHRS11Q6UWP2 260 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 GDPD4Q6W3E5 623 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 Q75L30 129 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 HDDC2Q7Z4H3 204 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR2L13Q8N349 312 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 SYT8Q8NBV8 401 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 SLC16A11Q8NCK7 471 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR52N1Q8NH53 320 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR51F2Q8NH61 342 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 RASSF5Q8WWW0 418 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 ABHD8Q96I13 439 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CELF6Q96J87 481 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 XPO6Q96QU8 1125 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CDCA4Q9BXL8 241 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 HRASLSQ9HDD0 168 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 STARD5Q9NSY2 213 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 PEX16Q9Y5Y5 336 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 A0A0J9YVX5 310 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CENPVL1A0A0U1RR11 272 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 A0A1B0GVI7 797 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 SLC22A20A6NK97 555 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 F5H768 121 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MAGEB4O15481 346 aaPredicted RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 ZMPSTE24O75844 475 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 FGF19O95750 216 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CSKP41240 450 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 RFX3P48380 749 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR10A3P58181 314 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 HHEXQ03014 270 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 SMIM15Q7Z3B0 74 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 Q8N402 240 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 PNLDC1Q8NA58 520 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 OR11L1Q8NGX0 322 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 FAM172AQ8WUF8 416 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MRPL24Q96A35 216 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MRIQ9BWK5 157 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 SLITRK2Q9H156 845 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 RWDD2AQ9UIY3 292 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 TRBV9A0A0B4J1U6 114 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PRSS44E7EML9 344 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 GPR137BO60478 399 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SRP72O76094 671 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ATP6V1G2O95670 118 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PGCP20142 388 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 BGNP21810 368 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CHATP28329 748 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CRABP2P29373 138 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 S100A7P31151 101 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SLC1A1P43005 524 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 FUT6P51993 359 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PAFAH1B2P68402 229 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF77Q15935 545 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 KCTD18Q6PI47 426 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PARM1Q6UWI2 310 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CTU1Q7Z7A3 348 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 MARCH9Q86YJ5 346 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 C10orf67Q8IYJ2 551 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 LINC00518Q8N0U6 118 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PTH2Q96A98 100 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 P2RY11Q96G91 374 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SIGLEC10Q96LC7 697 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 KCNA7Q96RP8 456 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ADOQ96SZ5 270 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 EBNA1BP2Q99848 306 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 METTL17Q9H7H0 456 aaPredicted RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 RCL1Q9Y2P8 373 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM213A2RRL7 107 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 DYNC1I1O14576 645 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 NUAK1O60285 661 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 HSBP1O75506 76 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 KRT33AO76009 404 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SERPINA1P01009 418 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 MYOGP15173 224 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 S100A1P23297 94 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 IVDP26440 423 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 ELK4P28324 431 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SFTPDP35247 375 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 DNASE1L1P49184 302 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 RBM39Q14498 530 aaKnown RBP4.56□□□□□ -1.68
NIPBL-204ENST00000504430 RFX4Q33E94 735 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 GCSAMLQ5JQS6 135 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CCNJQ5T5M9 372 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SLC27A4Q6P1M0 643 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 PRUNE1Q86TP1 453 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CLDN19Q8N6F1 224 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SMRP1Q8NCR6 262 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 MRAPQ8TCY5 172 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 SFXN5Q8TD22 340 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 OR8D1Q8WZ84 308 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 CPXM1Q96SM3 734 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 GLIPR2Q9H4G4 154 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 EGLN3Q9H6Z9 239 aa4.56□□□□□ -1.68
NIPBL-204ENST00000504430 C3orf14Q9HBI5 128 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms