RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 IL5RAQ01344 420 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 CDK5R2Q13319 367 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 MFSD13AQ14CX5 517 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 TMEM236Q5W0B7 351 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ACSM5Q6NUN0 579 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 IGFL3Q6UXB1 125 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 CASP12Q6UXS9 341 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 LNX2Q8N448 690 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 OR2T33Q8NG76 320 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 RHOXF1Q8NHV9 184 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF566Q969W8 418 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 GPX7Q96SL4 187 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PIGQQ9BRB3 760 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 TEX12Q9BXU0 123 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 POLDIP3Q9BY77 421 aaKnown RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 HES7Q9BYE0 225 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF696Q9H7X3 374 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 IMPAD1Q9NX62 359 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 QPCTLQ9NXS2 382 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 BAIAP2Q9UQB8 552 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
VPS26A-209ENST00000497564 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.36
VPS26A-209ENST00000497564 OR2M5A3KFT3 312 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 TTLL8A6PVC2 850 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 LRRN3E7EW58 273 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 BHLHE40O14503 412 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 HMGN1P05114 100 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 HPNP05981 417 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 LYNP07948 512 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 SLC6A6P31641 620 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 UQCRC1P31930 480 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 B3GALT5-AS1P59052 145 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 TOP3AQ13472 1001 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 SYT14P1Q58G82 188 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 ZNF766Q5HY98 468 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 RBM48Q5RL73 367 aaKnown RBP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 MAMDC2Q7Z304 686 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 ZFP62Q8NB50 900 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 OR8J1Q8NGP2 316 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 OR51A7Q8NH64 312 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 MIB2Q96AX9 1013 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS26A-209ENST00000497564 MYRFQ9Y2G1 1151 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 HDGFL3Q9Y3E1 203 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
VPS26A-209ENST00000497564 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 LINC01387J3KSC0 135 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 WBP4O75554 376 aaKnown RBP12.76□□□□□ -0.37
VPS26A-209ENST00000497564 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 IL11P20809 199 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 IDUAP35475 653 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 PCYT1AP49585 367 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 MEOX1P50221 254 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 SGCBQ16585 318 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 CLEC12AQ5QGZ9 265 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 TMEM201Q5SNT2 666 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 NANOGNBQ7Z5D8 188 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 C10orf53Q8N6V4 93 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-209ENST00000497564 OR5J2Q8NH18 312 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 APH1BQ8WW43 257 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 PNPLA2Q96AD5 504 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 NDEL1Q9GZM8 345 aa12.76□□□□□ -0.37
VPS26A-209ENST00000497564 ENKD1Q9H0I2 346 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms