RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 MEP1AQ16819 746 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 MTFR2Q6P444 385 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 UBE2R2Q712K3 238 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CMC1Q7Z7K0 106 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 NAA40Q86UY6 237 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 FAM129CQ86XR2 697 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 PLD3Q8IV08 490 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RAB42Q8N4Z0 105 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 PHYHIPQ92561 330 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SLC38A4Q969I6 547 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TM4SF18Q96CE8 201 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 FBXO17Q96EF6 278 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 FOXN4Q96NZ1 517 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 OR2A14Q96R47 310 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TAAR6Q96RI8 345 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RNF2Q99496 336 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 GPR22Q99680 433 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 ACTL8Q9H568 366 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF430Q9H8G1 570 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RNF121Q9H920 327 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 OR52A1Q9UKL2 312 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 UTS2RQ9UKP6 389 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SLC5A6Q9Y289 635 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 MSRB2Q9Y3D2 182 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 LOXL2Q9Y4K0 774 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 KIF26BQ2KJY2 2108 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 LAMA5O15230 3695 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 KNTC1P50748 2209 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SERPINE3A8MV23 424 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 BLOC1S5-TXNDC5H3BN57 136 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 AK1P00568 194 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 GPIP06744 558 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 JMJD7P0C870 316 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 APEX1P27695 318 aaKnown RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 LIPAP38571 399 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 GDNFP39905 211 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 MAPK10P53779 464 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 ZFP36L1Q07352 338 aaKnown RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TSTA3Q13630 321 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SLC9A3R2Q15599 337 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 C16orf46Q6P387 395 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RANBP3LQ86VV4 465 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CPOQ8IVL8 374 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 DEFB107AQ8IZN7 70 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CREB3L1Q96BA8 519 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CMKLR1Q99788 373 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 GPR87Q9BY21 358 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 FN3KQ9H479 309 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 PLEK2Q9NYT0 353 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 hCG_1809904A0A1W2PP81 198 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 A0A1W2PPE2 198 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 A0A1W2PR64 198 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 A4D1N5 150 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 NQO2P16083 231 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 SSTR2P30874 369 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 RAB10P61026 200 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 SHC2P98077 582 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 TRAF3Q13114 568 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 GUK1Q16774 197 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 NHLRC3Q5JS37 347 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 FAM74A1Q5RGS3 127 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 SPATA46Q5T0L3 261 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 OR8G2PQ6IF36 304 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM207Q6UWW9 146 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 FOXRED2Q8IWF2 684 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 ADGRF3Q8IZF5 1079 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 FBXO39Q8N4B4 442 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
BRCA1-222ENST00000493919 FAR1Q8WVX9 515 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 SMPDL3AQ92484 453 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 MRGPRFQ96AM1 343 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 LIN37Q96GY3 246 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-222ENST00000493919 SPSB2Q99619 263 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 THUMPD3Q9BV44 507 aaKnown RBP10.65□□□□□ -0.7
BRCA1-222ENST00000493919 RAB11FIP5Q9BXF6 653 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 OPTCQ9UBM4 332 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 POMT2Q9UKY4 750 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 IGF2RP11717 2491 aa10.65□□□□□ -0.7
BRCA1-222ENST00000493919 DMXL2Q8TDJ6 3036 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 CFAP47Q6ZTR5 3102 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-222ENST00000493919 A0A1W2PRV1 198 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 NPEPPSL1A6NEC2 478 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 TLCD2A6NGC4 264 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 ISM1B1AKI9 464 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 WBP4O75554 376 aaKnown RBP10.64□□□□□ -0.71
BRCA1-222ENST00000493919 AKR7A3O95154 331 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 C6orf47O95873 294 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 IGHV2-5P01817 119 aa10.64□□□□□ -0.71
BRCA1-222ENST00000493919 CALCRP30988 508 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms