RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CPNE5Q9HCH3 593 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 PARD6AQ9NPB6 346 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 NDUFB11Q9NX14 153 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 HAO2Q9NYQ3 351 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 FOXJ2Q9P0K8 574 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 STUB1Q9UNE7 303 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 FARSAQ9Y285 508 aaKnown RBP8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 SPIN1Q9Y657 262 aaPredicted RBP8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 KIAA1549Q9HCM3 1950 aa8.29□□□□□ -1.08
SMARCC1-208ENST00000492896 VCANP13611 3396 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 PCSK5Q92824 1860 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 A0A1W2PNU3 283 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 DAPL1A0PJW8 107 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 PCNX2A6NKB5 2137 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 C21orf140B9A014 251 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ETV2O00321 342 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 AKAP8O43823 692 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 OR2T1O43869 369 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SERPINI2O75830 405 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TXNDC12O95881 172 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GYPBP06028 91 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 MRPL3P09001 348 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SBK2P0C263 348 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ICAM2P13598 275 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 PSMA1P25786 263 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CD79BP40259 229 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CASP3P42574 277 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SLC25A1P53007 311 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 MLF1P58340 268 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TUBA1BP68363 451 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SNTA1Q13424 505 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 IL10RAQ13651 578 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GGTLC2Q14390 218 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TRIP6Q15654 476 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SGCBQ16585 318 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 PLPPR5Q32ZL2 321 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SLC25A53Q5H9E4 307 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 LEG1Q6P5S2 330 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ZNF322Q6U7Q0 402 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 B3GLCTQ6Y288 498 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GDPGP1Q6ZNW5 385 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TUBA1AQ71U36 451 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 RPS19BP1Q86WX3 136 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 RAB43Q86YS6 212 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 PHC2Q8IXK0 858 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TMEM99Q8N816 258 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 POMGNT2Q8NAT1 580 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 NPEPL1Q8NDH3 523 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 NLGN4YQ8NFZ3 816 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 OR4K17Q8NGC6 315 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SPRYD4Q8WW59 207 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SLC25A36Q96CQ1 311 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 DDIT4LQ96D03 193 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 MRGPRX4Q96LA9 322 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TSPAN32Q96QS1 320 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 NMNAT3Q96T66 252 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CNN2Q99439 309 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 TEAD3Q99594 435 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ZNF649Q9BS31 505 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CENPOQ9BU64 300 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CDCP1Q9H5V8 836 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 ADGRL4Q9HBW9 690 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 EXOSC4Q9NPD3 245 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CCDC59Q9P031 241 aaKnown RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 GRHPRQ9UBQ7 328 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 FBXL4Q9UKA2 621 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 SSR3Q9UNL2 185 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 VDAC3Q9Y277 283 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CAB39Q9Y376 341 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 CHCHD2Q9Y6H1 151 aaPredicted RBP8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 DOCK10Q96BY6 2186 aa8.28□□□□□ -1.08
SMARCC1-208ENST00000492896 OR6C68A6NDL8 312 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 B4DXG7 233 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 ZNF208O43345 1280 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 RAD1O60671 282 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 GPX5O75715 221 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 OR6A2O95222 327 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 WISP1O95388 367 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 RENP00797 406 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 IGHMP01871 453 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 F13BP05160 661 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 SPI1P17947 270 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 GTF2E2P29084 291 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 GRPRP30550 384 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 IDUAP35475 653 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 TGFBR1P36897 503 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 DLSTP36957 453 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 CAPZA2P47755 286 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 MAP2K6P52564 334 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 LIMK1P53667 647 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 RPS3AP61247 264 aaKnown RBP8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 BDH1Q02338 343 aa8.27□□□□□ -1.09
SMARCC1-208ENST00000492896 ACSM1Q08AH1 577 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms