RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 STX7O15400 261 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 PSTPIP1O43586 416 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 SPOPO43791 374 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 LCA5LO95447 670 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 SLC4A1P02730 911 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 VCLP18206 1134 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 HLA-DPA1P20036 260 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 DEKP35659 375 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 DLSTP36957 453 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 SPAM1P38567 509 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 MAGEA1P43355 309 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 MARCKSL1P49006 195 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 HADHBP55084 474 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 MTCP1P56278 107 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 WNT4P56705 351 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 PPP1CAP62136 330 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 XIAPP98170 497 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 XRCC4Q13426 336 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 NFE2L1Q14494 772 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 TAF1AQ15573 450 aaPredicted RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 PCK2Q16822 640 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ZNF658BQ4V348 819 aaPredicted RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 BCL7AQ4VC05 210 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 LDLRAP1Q5SW96 308 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ZNF544Q6NX49 715 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 IRGCQ6NXR0 463 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 FAM199XQ6PEV8 388 aaPredicted RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 DHRS11Q6UWP2 260 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 FAM151BQ6UXP7 276 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 RBPMS2Q6ZRY4 209 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 FAM92BQ6ZTR7 304 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 PID1Q7Z2X4 250 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 TMEM135Q86UB9 458 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 AMIGO1Q86WK6 493 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 TRAPPC5Q8IUR0 188 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ZNF567Q8N184 647 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 SIDT2Q8NBJ9 832 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 IPMKQ8NFU5 416 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 OR4K2Q8NGD2 314 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 GDAP1Q8TB36 358 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 BLOC1S5Q8TDH9 187 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 CT55Q8WUE5 264 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 NAT14Q8WUY8 206 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ANP32BQ92688 251 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 KRT35Q92764 455 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 P3H4Q92791 437 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 CXorf40BQ96DE9 158 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ZBED6CLQ96FA7 236 aaPredicted RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 ZNF514Q96K75 400 aaPredicted RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 TTC25Q96NG3 672 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 RCHY1Q96PM5 261 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 QKIQ96PU8 341 aaKnown RBP eCLIP2.45□□□□□ -2.02
PHC3-213ENST00000491258 RUFY1Q96T51 708 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 VAT1Q99536 393 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 HES7Q9BYE0 225 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 GOLPH3Q9H4A6 298 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 KIR3DX1Q9H7L2 352 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 C10orf88Q9H8K7 445 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 PLEKHA3Q9HB20 300 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 LHX9Q9NQ69 397 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 SMOXQ9NWM0 555 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 HRASLS2Q9NWW9 162 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 ANKMY1Q9P2S6 941 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 FARSAQ9Y285 508 aaKnown RBP2.45□□□□□ -2.02
PHC3-213ENST00000491258 ARL5AQ9Y689 179 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 TSC2P49815 1807 aa2.45□□□□□ -2.02
PHC3-213ENST00000491258 IGLV3-16A0A075B6K0 115 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 A0A1W2PPW3 197 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TLCD2A6NGC4 264 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SLC9B1P1A6NJY1 282 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 OR2AG2A6NM03 316 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 FOXI3A8MTJ6 420 aaPredicted RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 MKRN2OSH3BPM6 223 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 H7C0C1 242 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 APOC4-APOC2K7ER74 178 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 BTN3A3O00478 584 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ANXA9O76027 345 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SRP72O76094 671 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 APOC2P02655 101 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 MT-ND3P03897 115 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 CAPN1P07384 714 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TPM1P09493 284 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ATP1B2P14415 290 aaPredicted RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 PSMA3P25788 255 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 GDF1P27539 372 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 PTPN4P29074 926 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 PRDX3P30048 256 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 CTNNA1P35221 906 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 RORAP35398 523 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 RBMXP38159 391 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 CASP2P42575 452 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TNNT3P45378 269 aaPredicted RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 ATP5OP48047 213 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 CD151P48509 253 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 CCL11P51671 97 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 KPNA2P52292 529 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 ZNF140P52738 457 aaPredicted RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 GEMP55040 296 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 EIF3EP60228 445 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 KLRB1Q12918 225 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms