RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ZNF649Q9BS31 505 aa20.77■□□□□ 0.92
USF3-203ENST00000491165 ASB6Q9NWX5 421 aa20.77■□□□□ 0.92
USF3-203ENST00000491165 PAQR5Q9NXK6 330 aaPredicted RBP20.77■□□□□ 0.92
USF3-203ENST00000491165 MALT1Q9UDY8 824 aa20.77■□□□□ 0.92
USF3-203ENST00000491165 PCDHGB7Q9Y5F8 929 aa20.77■□□□□ 0.92
USF3-203ENST00000491165 NOX1Q9Y5S8 564 aa20.77■□□□□ 0.92
USF3-203ENST00000491165 SPENQ96T58 3664 aaKnown RBP20.77■□□□□ 0.92
USF3-203ENST00000491165 FCMRO60667 390 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 ADRB1P08588 477 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 IL18Q14116 193 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 EXOSC6Q5RKV6 272 aaKnown RBP20.77■□□□□ 0.91
USF3-203ENST00000491165 MZT2BQ6NZ67 158 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 ZSCAN1Q8NBB4 408 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 BBS1Q8NFJ9 593 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 OR2T33Q8NG76 320 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 SLC35A4Q96G79 324 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 VSTM2LQ96N03 204 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 FYTTD1Q96QD9 318 aaKnown RBP20.77■□□□□ 0.91
USF3-203ENST00000491165 SECISBP2Q96T21 854 aaKnown RBP20.77■□□□□ 0.91
USF3-203ENST00000491165 H2AFY2Q9P0M6 372 aaPredicted RBP20.77■□□□□ 0.91
USF3-203ENST00000491165 C19orf25Q9UFG5 118 aaPredicted RBP20.77■□□□□ 0.91
USF3-203ENST00000491165 CDH10Q9Y6N8 788 aa20.77■□□□□ 0.91
USF3-203ENST00000491165 ACACAQ13085 2346 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 DUXAA6NLW8 204 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 CENPBD1B2RD01 187 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 PIP5K1CO60331 668 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 NCR1O76036 304 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 THY1P04216 161 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 HMGN1P05114 100 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 IFI6P09912 130 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 MAP3K8P41279 467 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 EVX1P49640 407 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 SLC26A5P58743 744 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 PSG6Q00889 435 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 HEPHL1Q6MZM0 1159 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 TOR1AIP2Q8NFQ8 470 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 TMEM255BQ8WV15 326 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 DNAJA4Q8WW22 397 aaPredicted RBP20.76■□□□□ 0.91
USF3-203ENST00000491165 JAM3Q9BX67 310 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 ZNF700Q9H0M5 742 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 CACYBPQ9HB71 228 aaKnown RBP20.76■□□□□ 0.91
USF3-203ENST00000491165 RBFOX1Q9NWB1 397 aaKnown RBP20.76■□□□□ 0.91
USF3-203ENST00000491165 CBLCQ9ULV8 474 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 PPIEQ9UNP9 301 aaKnown RBP20.76■□□□□ 0.91
USF3-203ENST00000491165 ZNF443Q9Y2A4 671 aaPredicted RBP20.76■□□□□ 0.91
USF3-203ENST00000491165 MED13Q9UHV7 2174 aa20.76■□□□□ 0.91
USF3-203ENST00000491165 SCO2O43819 266 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 PRKAR1AP10644 381 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 P2RY14Q15391 338 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 NNATQ16517 81 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 DUSP5Q16690 384 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 FRRS1Q6ZNA5 592 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 IMMP1LQ96LU5 166 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 SLX1AQ9BQ83 275 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 SEMA4CQ9C0C4 833 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 FOLH1BQ9HBA9 442 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 KRCC1Q9NPI7 259 aaPredicted RBP20.75■□□□□ 0.91
USF3-203ENST00000491165 TNFRSF10DQ9UBN6 386 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 ADAM30Q9UKF2 790 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 BOLA1Q9Y3E2 137 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 DOCK10Q96BY6 2186 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 IGF2RP11717 2491 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 A0A1W2PQ72 361 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 PRAMEF2O60811 474 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 CD83Q01151 205 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 RIN1Q13671 783 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 ZNF322Q6U7Q0 402 aaPredicted RBP20.75■□□□□ 0.91
USF3-203ENST00000491165 NPSR1Q6W5P4 371 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 IL20RAQ9UHF4 553 aa20.75■□□□□ 0.91
USF3-203ENST00000491165 SHISA3A0PJX4 238 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CD8B2A6NJW9 211 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 SLC2A10O95528 541 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CT45A8P0DMV1 189 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CT45A9P0DMV2 189 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CD8BP10966 210 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 PSKH1P11801 424 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CT45A2Q5DJT8 189 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 VASNQ6EMK4 673 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 KLBQ86Z14 1044 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 PEX5LQ8IYB4 626 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 OR4N2Q8NGD1 307 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 SAMD8Q96LT4 415 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 BEX2Q9BXY8 128 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 SLA2Q9H6Q3 261 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 ZNF160Q9HCG1 818 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 B3GAT2Q9NPZ5 323 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 HINT3Q9NQE9 182 aaKnown RBP20.74■□□□□ 0.91
USF3-203ENST00000491165 P4HTMQ9NXG6 502 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 ATMQ13315 3056 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CHD8Q9HCK8 2581 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 AGR2O95994 175 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 ZNF24P17028 368 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 GALP22466 123 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 INSL4Q14641 139 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 EBPQ15125 230 aaKnown RBP20.74■□□□□ 0.91
USF3-203ENST00000491165 TATDN3Q17R31 274 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 CDC73Q6P1J9 531 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 C16orf47Q6ZP98 133 aaPredicted RBP20.74■□□□□ 0.91
USF3-203ENST00000491165 CPOQ8IVL8 374 aa20.74■□□□□ 0.91
USF3-203ENST00000491165 C7orf57Q8NEG2 295 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms