RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GIMAP2Q9UG22 337 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 TBK1Q9UHD2 729 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 IGHV2OR16-5A0A0B4J2B6 119 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CLDN24A6NM45 220 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 RPL36A-HNRNPH2H7BZ11 118 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TRIM77I1YAP6 450 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 RNASET2O00584 256 aaKnown RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 AP3D1O14617 1153 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 NPHS1O60500 1241 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TRIM13O60858 407 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 VAMP5O95183 116 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TFP02787 698 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CHRNGP07510 517 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 MSMBP08118 114 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CBR1P16152 277 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CCNA2P20248 432 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TACR3P29371 465 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 EVX1P49640 407 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CCNIQ14094 377 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 SLC9B1Q4ZJI4 515 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 ELFN2Q5R3F8 820 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 ATAD3BQ5T9A4 648 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 IL23RQ5VWK5 629 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CREB3L2Q70SY1 520 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 LINGO2Q7L985 606 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 SPATA21Q7Z572 469 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 PEG10Q86TG7 708 aaKnown RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 MYPOPQ86VE0 399 aaPredicted RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 CDK20Q8IZL9 346 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CLECL1Q8IZS7 167 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TEX29Q8N6K0 151 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CCDC63Q8NA47 563 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 IL17RDQ8NFM7 739 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 OR8J2Q8NGG1 315 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CLDND2Q8NHS1 167 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CKAP2Q8WWK9 683 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 CNOT9Q92600 299 aaKnown RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 GCDHQ92947 438 aaPredicted RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 ZG16BQ96DA0 208 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 C3orf30Q96M34 536 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 ALKBH3Q96Q83 286 aaPredicted RBP7.07□□□□□ -1.28
USP39-216ENST00000490193 JMJD8Q96S16 334 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 C1orf50Q9BV19 199 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TXLNGYQ9BZA5 131 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 ZNF696Q9H7X3 374 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 DYNLRB1Q9NP97 96 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 HIF1ANQ9NWT6 349 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 ASIC5Q9NY37 505 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 PCDHB10Q9UN67 800 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 GRIP1Q9Y3R0 1128 aa7.07□□□□□ -1.28
USP39-216ENST00000490193 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 PRAMEF27A3QJZ7 478 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 AGAP5A6NIR3 686 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 TMEM229AB2RXF0 380 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 LYNX1G3V0Z9 82 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 NR5A2O00482 541 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 COPEO14579 308 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 SYNGR3O43761 229 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 SCN2BO60939 215 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 KRT33AO76009 404 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 AKR7A3O95154 331 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 CELA3BP08861 270 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 ADRA2AP08913 450 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 OR12D1P0DN82 309 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 LYNX1P0DP58 116 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 EPHA1P21709 976 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 RPS4Y1P22090 263 aaKnown RBP7.06□□□□□ -1.28
USP39-216ENST00000490193 ACHEP22303 614 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 ARR3P36575 388 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 SELENOPP49908 381 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 CLDN8P56748 225 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 MRPS11P82912 194 aaKnown RBP7.06□□□□□ -1.28
USP39-216ENST00000490193 IL1RL1Q01638 556 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 EPS8Q12929 822 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 MAD2L1Q13257 205 aaPredicted RBP7.06□□□□□ -1.28
USP39-216ENST00000490193 CEACAM7Q14002 265 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 OR7A5Q15622 319 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 GSTA3Q16772 222 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 PDLIM3Q53GG5 364 aaPredicted RBP7.06□□□□□ -1.28
USP39-216ENST00000490193 SAXO2Q658L1 398 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 TMEM225Q6GV28 225 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 OR4F3Q6IEY1 312 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 SHQ1Q6PI26 577 aaKnown RBP7.06□□□□□ -1.28
USP39-216ENST00000490193 CLEC4FQ8N1N0 589 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 FNDC5Q8NAU1 212 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 XAGE5Q8WWM1 108 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 RAB8BQ92930 207 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 NEURL3Q96EH8 262 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 SLC38A1Q9H2H9 487 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 PPCSQ9HAB8 311 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 USP22Q9UPT9 525 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 RCE1Q9Y256 329 aa7.06□□□□□ -1.28
USP39-216ENST00000490193 A0A096LPE4 126 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TRAV20A0A0B4J274 112 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 A0A1W2PPZ6 126 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 ZNF503-AS2A6NEH8 195 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 CFAP73A6NFT4 308 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 M0R233 179 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms