RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 EPHX4Q8IUS5 362 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 PEX5LQ8IYB4 626 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF440Q8IYI8 595 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 LRRC34Q8IZ02 419 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 CADM2Q8N3J6 435 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF540Q8NDQ6 660 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 TAPBPLQ9BX59 468 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 PLK3Q9H4B4 646 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 SEC61A2Q9H9S3 476 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 CRNNQ9UBG3 495 aaPredicted RBP13.79□□□□□ -0.2
PLOD3-216ENST00000489927 LRP5LA4QPB2 252 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 A8MVM7 634 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 BIRC5O15392 142 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 FRS3O43559 492 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 UPK3AO75631 287 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 VAMP5O95183 116 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 PGRP06401 933 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 PAX7P23759 505 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 IL12AP29459 219 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 CALCRP30988 508 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 PPOXP50336 477 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 IDH3GP51553 393 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-216ENST00000489927 SQLEQ14534 574 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 CR1LQ2VPA4 569 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 C1orf140Q5VVS0 124 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 PRAMEF8Q5VWM4 474 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 PRAMEF7Q5VXH5 474 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 WBP2NLQ6ICG8 309 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 OGFOD2Q6N063 350 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 NIPAL3Q6P499 406 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 VRK2Q86Y07 508 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 OR52P1PQ8NH57 321 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF317Q96PQ6 595 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-216ENST00000489927 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 NELFAQ9H3P2 528 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 MEAF6Q9HAF1 191 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 HAO1Q9UJM8 370 aa13.78□□□□□ -0.2
PLOD3-216ENST00000489927 STAMBPO95630 424 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 IGLV1-44P01699 117 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 PRG2P13727 222 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 BGNP21810 368 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 COPZ1P61923 177 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 LIN52Q52LA3 116 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 ZCCHC24Q8N2G6 241 aaKnown RBP13.77□□□□□ -0.21
PLOD3-216ENST00000489927 OR4F15Q8NGB8 312 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-216ENST00000489927 RAB1BQ9H0U4 201 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 AIG1Q9NVV5 245 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 DSPPQ9NZW4 1301 aa13.77□□□□□ -0.21
PLOD3-216ENST00000489927 OR6C65A6NJZ3 312 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 NPIPB7O75200 414 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 SNUPNO95149 360 aaKnown RBP13.76□□□□□ -0.21
PLOD3-216ENST00000489927 IGKV3-15P01624 115 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 CELA3BP08861 270 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 TFPTP0C1Z6 253 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 DAOP14920 347 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 GIFP27352 417 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 IL2RGP31785 369 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 MVDP53602 400 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 ROR2Q01974 943 aaKnown RBP13.76□□□□□ -0.21
PLOD3-216ENST00000489927 HGFACQ04756 655 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 ZSWIM7Q19AV6 140 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 LIPNQ5VXI9 398 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
PLOD3-216ENST00000489927 KDM8Q8N371 416 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 CLIP4Q8N3C7 705 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 FAM169BQ8N8A8 192 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 NUP37Q8NFH4 326 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
PLOD3-216ENST00000489927 TMEM109Q9BVC6 243 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 LINC00470Q9BZP3 86 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 SLC6A13Q9NSD5 602 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 P2RX2Q9UBL9 471 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 PRDM4Q9UKN5 801 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 RASD1Q9Y272 281 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 ZNF443Q9Y2A4 671 aaPredicted RBP13.76□□□□□ -0.21
PLOD3-216ENST00000489927 CHST2Q9Y4C5 530 aa13.76□□□□□ -0.21
PLOD3-216ENST00000489927 A0A096LPI6 279 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 TMEM229AB2RXF0 380 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 FTCDNL1E5RQL4 147 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SDHDO14521 159 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 LILRA1O75019 489 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 KRT75O95678 551 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 BCHEP06276 602 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 ETFAP13804 333 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 NCF2P19878 526 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-216ENST00000489927 THBS4P35443 961 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-216ENST00000489927 LRRC74AQ0VAA2 488 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 RPS26P11Q5JNZ5 115 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-216ENST00000489927 RNF220Q5VTB9 566 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SERPINA11Q86U17 422 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 KIRREL3Q8IZU9 778 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SVOPLQ8N434 492 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SLC38A5Q8WUX1 472 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 SLC25A36Q96CQ1 311 aa13.75□□□□□ -0.21
PLOD3-216ENST00000489927 C1orf159Q96HA4 380 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms