RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CDC40O60508 579 aaKnown RBP eCLIP7.72□□□□□ -1.17
VTI1A-207ENST00000489357 SLC19A2O60779 497 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 RFPL3O75679 317 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 OR7A10O76100 309 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ONECUT2O95948 504 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 CH25HO95992 272 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 CD97P48960 835 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 PGDP52209 483 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 SLC25A1P53007 311 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 PNLIPRP2P54317 469 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 MAT1AQ00266 395 aaKnown RBP7.72□□□□□ -1.17
VTI1A-207ENST00000489357 IFITM3Q01628 133 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ACY1Q03154 408 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 SKP2Q13309 424 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 HSPB2Q16082 182 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 HLA-DQA1Q5Y7H0 255 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 STEAP3Q658P3 488 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 RHBDD2Q6NTF9 364 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 PAQR6Q6TCH4 344 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 KIRREL2Q6UWL6 708 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 TTLL10Q6ZVT0 673 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 TRILQ7L0X0 811 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 KCTD20Q7Z5Y7 419 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ZBTB46Q86UZ6 589 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 TMPRSS12Q86WS5 348 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 SIRT6Q8N6T7 355 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 PLPP5Q8NEB5 264 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ATP6V1C2Q8NEY4 427 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 OR4F15Q8NGB8 312 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 OR4C3Q8NH37 302 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 IFI44Q8TCB0 444 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 GRHL3Q8TE85 626 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ZNF721Q8TF20 911 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 PTP4A1Q93096 173 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ADIPOR1Q96A54 375 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 C3orf49Q96BT1 292 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 ALG8Q9BVK2 526 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 BARHL1Q9BZE3 327 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 LAT2Q9GZY6 243 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 SPRTNQ9H040 489 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-207ENST00000489357 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.72□□□□□ -1.17
VTI1A-207ENST00000489357 MCCC2Q9HCC0 563 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 NRIP3Q9NQ35 241 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 NPAP1Q9NZP6 1156 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 RABL2AQ9UBK7 228 aaPredicted RBP7.72□□□□□ -1.17
VTI1A-207ENST00000489357 RABL2BQ9UNT1 228 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 MOKQ9UQ07 419 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 DTX4Q9Y2E6 619 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 CARD8Q9Y2G2 431 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 HIF3AQ9Y2N7 669 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 EPG5Q9HCE0 2579 aa7.72□□□□□ -1.17
VTI1A-207ENST00000489357 URB1O60287 2271 aaKnown RBP7.71□□□□□ -1.17
VTI1A-207ENST00000489357 NPIPA5A0A0B4J1W7 369 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 C1QTNF9BB2RNN3 333 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ALG1L2C9J202 215 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 NPIPA7E9PJI5 369 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 GABRPO00591 440 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 RGS5O15539 181 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 TBX1O43435 398 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 GPRIN2O60269 458 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CDC123O75794 336 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CDRT1O95170 752 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 UTS2O95399 124 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 DDAH2O95865 285 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 TXNDC12O95881 172 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 MT-ATP6P00846 226 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CTSBP07858 339 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 C1QTNF9P0C862 333 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 NPIPA8P0DM63 369 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CELP19835 753 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 PPM1FP49593 454 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 MAP2K6P52564 334 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 RPS25P62851 125 aaKnown RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 RAC1P63000 192 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 DAB2P98082 770 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 FABP5Q01469 135 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CFHR1Q03591 330 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ZFP36L1Q07352 338 aaKnown RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SCN1BQ07699 218 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CRYZQ08257 329 aaKnown RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 FHL1Q13642 323 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 DOC2BQ14184 412 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CRMP1Q14194 572 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 PON3Q15166 354 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SOWAHCQ53LP3 525 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 GPR139Q6DWJ6 353 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 C22orf42Q6IC83 251 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 TMEM71Q6P5X7 295 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 DHRS13Q6UX07 377 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SLC29A4Q7RTT9 530 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.18
VTI1A-207ENST00000489357 LHFPL3Q86UP9 236 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 SLC22A16Q86VW1 577 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 CADM2Q8N3J6 435 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 OR4N2Q8NGD1 307 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 OR51G2Q8NGK0 314 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 OR1N1Q8NGS0 311 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 OR6S1Q8NH40 331 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
VTI1A-207ENST00000489357 NEIL3Q8TAT5 605 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms