RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ZNF613Q6PF04 617 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 C5orf46Q6UWT4 87 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 CARM1Q86X55 608 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 SLC15A3Q8IY34 581 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 CMTM5Q96DZ9 223 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 ZNF385AQ96PM9 386 aaKnown RBP20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 SF3B5Q9BWJ5 86 aaKnown RBP20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 OR10A4Q9H209 315 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 ST6GALNAC2Q9UJ37 374 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 PLEKHA6Q9Y2H5 1048 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 SH3GLB1Q9Y371 365 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 PRRC2AP48634 2157 aaKnown RBP20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 PLCE1Q9P212 2302 aa20.92■□□□□ 0.94
RHBDD3-205ENST00000488106 M0R082 166 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 NME4O00746 187 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 COX5AP20674 150 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 CYBRD1Q53TN4 286 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 SWT1Q5T5J6 900 aaKnown RBP20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 TSPYL5Q86VY4 417 aaPredicted RBP20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 ZNF417Q8TAU3 575 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 ADAMTS16Q8TE57 1224 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 HS3ST6Q96QI5 342 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 ZNF587Q96SQ5 575 aaPredicted RBP20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 PLEKHF2Q9H8W4 249 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 BAG5Q9UL15 447 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 AP3M1Q9Y2T2 418 aa20.91■□□□□ 0.94
RHBDD3-205ENST00000488106 ARID1AO14497 2285 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 ITPR3Q14573 2671 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 ENO4A6NNW6 628 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 CHP2O43745 196 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 OR2T1O43869 369 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 SHOX2O60902 331 aaPredicted RBP20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 RAD51DO75771 328 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 CNOT4O95628 575 aaKnown RBP20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 IFNA14P01570 189 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 GRPRP30550 384 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 FAPQ12884 760 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 TAB1Q15750 504 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 C8orf82Q6P1X6 216 aaPredicted RBP20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 PAMR1Q6UXH9 720 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 HACD2Q6Y1H2 254 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 DEF8Q6ZN54 512 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 AAED1Q7RTV5 226 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 KDM8Q8N371 416 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 C10orf53Q8N6V4 93 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 ZIC4Q8N9L1 334 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 TMEM45BQ96B21 275 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 EPYCQ99645 322 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 HOPXQ9BPY8 73 aaPredicted RBP20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 PARPBPQ9NWS1 579 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 ASB6Q9NWX5 421 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 MALT1Q9UDY8 824 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 SLC7A7Q9UM01 511 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 RASD1Q9Y272 281 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 ARL2BPQ9Y2Y0 163 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 F8P00451 2351 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 MED13LQ71F56 2210 aa20.9■□□□□ 0.94
RHBDD3-205ENST00000488106 TEP1Q99973 2627 aaKnown RBP20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 VAMP5O95183 116 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 KDELR2P33947 212 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 IL1RL1Q01638 556 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 BEX5Q5H9J7 111 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 C9orf135Q5VTT2 229 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 WDR88Q6ZMY6 472 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 ZNF433Q8N7K0 673 aaPredicted RBP20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 TPD52L3Q96J77 140 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 TMEM43Q9BTV4 400 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 ALG2Q9H553 416 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 SLC7A10Q9NS82 523 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 UPB1Q9UBR1 384 aa20.89■□□□□ 0.93
RHBDD3-205ENST00000488106 TRAPPC13A5PLN9 417 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 GSTA4O15217 222 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 KLF4O43474 513 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 THY1P04216 161 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 GGT1P19440 569 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 PRDX6P30041 224 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 OR1E2P47887 323 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 GSK3BP49841 420 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 IST1P53990 364 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 FOXG1P55316 489 aaPredicted RBP20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 TSPO2Q5TGU0 170 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 CREB3L2Q70SY1 520 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 PLPPR2Q96GM1 343 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 PCDHAC1Q9H158 963 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 SLCO5A1Q9H2Y9 848 aa20.88■□□□□ 0.93
RHBDD3-205ENST00000488106 CIB4A0PJX0 185 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 LRRN3E7EW58 273 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 KPNA4O00629 521 aaPredicted RBP20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 FZD7O75084 574 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 LYPD3O95274 346 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 BGLAPP02818 100 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 ITGA5P08648 1049 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 NQO1P15559 274 aaKnown RBP20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 DNASE1P24855 282 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 LOXP28300 417 aaPredicted RBP20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 PSME3P61289 254 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 PIGWQ7Z7B1 504 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 EPHX4Q8IUS5 362 aa20.87■□□□□ 0.93
RHBDD3-205ENST00000488106 HSD17B8Q92506 261 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms