RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MCCC2Q9HCC0 563 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 POLE4Q9NR33 117 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 MMP26Q9NRE1 261 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 SMPD3Q9NY59 655 aaPredicted RBP2.58□□□□□ -2
HMGB1P36-201ENST00000487709 EXTL2Q9UBQ6 330 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 SEC14L3Q9UDX4 400 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 KIF25Q9UIL4 384 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF225Q9UK10 706 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 MEMO1Q9Y316 297 aa2.58□□□□□ -2
HMGB1P36-201ENST00000487709 A0A0G2JRQ6 117 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 A0A1B0GUA9 196 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 WI2-2373I1.2A0A1W2PRP0 233 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 USP27XA6NNY8 438 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 C12orf71A8MTZ7 269 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 MBTPS2O43462 519 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 PRKAB2O43741 272 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 TOM1O60784 492 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 RAMP3O60896 148 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 SNNO75324 88 aaPredicted RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CA11O75493 328 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 KRT6AP02538 564 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 TBPP20226 339 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 SLC2A5P22732 501 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CXCR2P25025 360 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 MAGEA8P43361 318 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 VDAC2P45880 294 aaPredicted RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 ATP1B3P54709 279 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 AIF1P55008 147 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 GNB2P62879 340 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 HMGN5P82970 282 aaKnown RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 OGDHQ02218 1023 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 TGFBR3Q03167 851 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 MRPL28Q13084 256 aaKnown RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 OR5I1Q13606 314 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 GNMTQ14749 295 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 ZMYND11Q15326 602 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CYTH1Q15438 398 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 ZNF658BQ4V348 819 aaPredicted RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 C1orf220Q5T0J3 134 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CENPPQ6IPU0 288 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 KRTAP11-1Q8IUC1 163 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 MKXQ8IYA7 352 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 LRRC75A-AS1Q8N1F1 130 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 C20orf203Q8NBC4 194 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 SLC41A3Q96GZ6 507 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 FAM210BQ96KR6 192 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 SLC38A2Q96QD8 506 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 MRPL45Q9BRJ2 306 aaKnown RBP2.57□□□□□ -2
HMGB1P36-201ENST00000487709 ADAM28Q9UKQ2 775 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CLEC4AQ9UMR7 237 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 CHD4Q14839 1912 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 GTF3C1Q12789 2109 aa2.57□□□□□ -2
HMGB1P36-201ENST00000487709 SYNJ2BP-COX16A0A087WUM0 186 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 PSMB11A5LHX3 300 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 OR5B21A6NL26 309 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 E9PBE3 544 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 GFYI3L273 518 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 FAM189A1O60320 539 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 ERLIN2O94905 339 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 QARSP47897 775 aaKnown RBP2.56□□□□□ -2
HMGB1P36-201ENST00000487709 CDH4P55283 916 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 CHIT1Q13231 466 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 VGLL4Q14135 290 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 GRB7Q14451 532 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 DUSP7Q16829 419 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 PDZK1Q5T2W1 519 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 CASC10Q5T4H9 136 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 GPR157Q5UAW9 335 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 LRRC74BQ6ZQY2 392 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 H2AFVQ71UI9 128 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 PEX26Q7Z412 305 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 NECAB1Q8N987 351 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 SUMF2Q8NBJ7 301 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 OR5D13Q8NGL4 314 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 OR1N2Q8NGR9 330 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 PYROXD1Q8WU10 500 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 C10orf35Q96D05 121 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 TCEANC2Q96MN5 208 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 PLEKHF1Q96S99 279 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 YY1AP1Q9H869 796 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 NEUROG3Q9Y4Z2 214 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 SLC25A15Q9Y619 301 aa2.56□□□□□ -2
HMGB1P36-201ENST00000487709 NSG1A0A0A6YYJ2 146 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 TIMM8AO60220 97 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 NPIPB7O75200 414 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 TSPAN12O95859 305 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 OPN1MWP04001 364 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 PLEKP08567 350 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 OPN1MW2P0DN77 364 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 OPN1MW3P0DN78 364 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 NCF2P19878 526 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 CCNCP24863 283 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 GYG1P46976 350 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 HLCSP50747 726 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 DUSP3P51452 185 aaPredicted RBP2.55□□□□□ -2
HMGB1P36-201ENST00000487709 SCRN3Q0VDG4 424 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 PLD1Q13393 1074 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 BCL7AQ4VC05 210 aa2.55□□□□□ -2
HMGB1P36-201ENST00000487709 LRRC10Q5BKY1 277 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms