RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 TIMM23BQ5SRD1 257 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 TMEM225Q6GV28 225 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 NANOGP8Q6NSW7 305 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 TSPYL5Q86VY4 417 aaPredicted RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 RBM45Q8IUH3 476 aaKnown RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 EPHX4Q8IUS5 362 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 MFSD8Q8NHS3 518 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 VANGL1Q8TAA9 524 aaPredicted RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 C10orf82Q8WW14 230 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 IGFBPL1Q8WX77 278 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 PIGTQ969N2 578 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 ALKBH3Q96Q83 286 aaPredicted RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 ARHGDIGQ99819 225 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 TRIM2Q9C040 744 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 ESRP2Q9H6T0 727 aaKnown RBP13.94□□□□□ -0.18
GABPA-203ENST00000487266 NANOGQ9H9S0 305 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 UPB1Q9UBR1 384 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 ZFHX3Q15911 3703 aa13.94□□□□□ -0.18
GABPA-203ENST00000487266 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 M0QX08 132 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 M0R082 166 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 KRT34O76011 436 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 CDH2P19022 906 aaPredicted RBP13.93□□□□□ -0.18
GABPA-203ENST00000487266 CD247P20963 164 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 GTF2E2P29084 291 aaKnown RBP13.93□□□□□ -0.18
GABPA-203ENST00000487266 ZNF83P51522 516 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 CDH12P55289 794 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 RBBP4Q09028 425 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 GABRA6Q16445 453 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 CREB3L2Q70SY1 520 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 LINGO2Q7L985 606 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 POU5F2Q8N7G0 328 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 OR6T1Q8NGN1 323 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 ZNF417Q8TAU3 575 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 LRRC58Q96CX6 371 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 MUCL1Q96DR8 90 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 ZNF587Q96SQ5 575 aaPredicted RBP13.93□□□□□ -0.18
GABPA-203ENST00000487266 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 C1QTNF6Q9BXI9 259 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 SLCO5A1Q9H2Y9 848 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 C12orf10Q9HB07 376 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 DLL4Q9NR61 685 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 B3GAT1Q9P2W7 334 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 LAMP3Q9UQV4 416 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 SLC25A15Q9Y619 301 aa13.93□□□□□ -0.18
GABPA-203ENST00000487266 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 LRRN3E7EW58 273 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 ABCD4O14678 606 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 LGI1O95970 557 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 SOD3P08294 240 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 GRPRP30550 384 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 NRF1Q16656 503 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 VMACQ2NL98 169 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 MMEL1Q495T6 779 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 NIPAL3Q6P499 406 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 ULK3Q6PHR2 472 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 WDR88Q6ZMY6 472 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 RANBP3LQ86VV4 465 aaPredicted RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 ZNF611Q8N823 705 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 WDR31Q8NA23 367 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 DNAJA4Q8WW22 397 aaPredicted RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 MOGAT1Q96PD6 335 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 ZNF317Q96PQ6 595 aaPredicted RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 MCHR1Q99705 422 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 AMBRA1Q9C0C7 1298 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 GSX1Q9H4S2 264 aaPredicted RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 TMEM27Q9HBJ8 222 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 NGBQ9NPG2 151 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 MED4Q9NPJ6 270 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 PARPBPQ9NWS1 579 aa13.92□□□□□ -0.18
GABPA-203ENST00000487266 GMPR2Q9P2T1 348 aaKnown RBP13.92□□□□□ -0.18
GABPA-203ENST00000487266 TRAV36DV7A0A075B6V5 113 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 A0A087WUJ7 227 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 SHISA9B4DS77 424 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 FZD7O75084 574 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 UPK3AO75631 287 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 HPRP00739 348 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 THY1P04216 161 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 TNFRSF1BP20333 461 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 PTH2RP49190 550 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 CLDN17P56750 224 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 LTBQ06643 244 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 CYLC2Q14093 348 aaPredicted RBP13.91□□□□□ -0.18
GABPA-203ENST00000487266 ZNF672Q499Z4 452 aaPredicted RBP13.91□□□□□ -0.18
GABPA-203ENST00000487266 HIKESHIQ53FT3 197 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 FAM69AQ5T7M9 428 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 FAM91A1Q658Y4 838 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 CALHM3Q86XJ0 350 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
GABPA-203ENST00000487266 OR8J3Q8NGG0 315 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 FBXW5Q969U6 566 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 RCN3Q96D15 328 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 SLC47A1Q96FL8 570 aa13.91□□□□□ -0.18
GABPA-203ENST00000487266 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms