RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ALG3Q92685 438 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 SLCO2A1Q92959 643 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 DACT3Q96B18 629 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TRIB1Q96RU8 372 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PAFAH2Q99487 392 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NDNQ99608 321 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ANGPTL4Q9BY76 406 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 OPN3Q9H1Y3 402 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 TMEM185BQ9H7F4 350 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PLEKHF2Q9H8W4 249 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 IPPKQ9H8X2 491 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 PLEKHA2Q9HB19 425 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 GALPQ9UBC7 116 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF629Q9UEG4 869 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 FBXL17Q9UF56 701 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 CHRNA9Q9UGM1 479 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 NAGKQ9UJ70 344 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 EIF3LQ9Y262 564 aaKnown RBP6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ADAM18Q9Y3Q7 739 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF175Q9Y473 711 aa6.14□□□□□ -1.43
HDAC3-209ENST00000486618 HRNRQ86YZ3 2850 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 TRAV25A0A0B4J276 109 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 C13orf42A0A1B0GVH6 325 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 RAB19A4D1S5 217 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CBY3A6NI87 242 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CLDN4O14493 209 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ANKRD28O15084 1053 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF264O43296 627 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SCN2BO60939 215 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NOS1APO75052 506 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 GMNNO75496 209 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 OR2J2O76002 312 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 KDM4BO94953 1096 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 P04436 131 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 IFNA6P05013 189 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HIST1H2AGP0C0S8 130 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 G6PDP11413 515 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CDH1P12830 882 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CYP4B1P13584 511 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 BMP7P18075 431 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ADRA2CP18825 462 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HIST1H2ADP20671 130 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 DDCP20711 480 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PSMB6P28072 239 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HNRNPH1P31943 449 aaKnown RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SOX3P41225 446 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MC3RP41968 323 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 LGALS4P56470 323 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 WNT3P56703 355 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CRADDP78560 199 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SORDQ00796 357 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SLC13A2Q13183 592 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NAE1Q13564 534 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MFSD13AQ14CX5 517 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF750Q32MQ0 723 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 TBRG1Q3YBR2 411 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 C6orf136Q5SQH8 315 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CCNYL2Q5T2Q4 361 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PRAMEF5Q5TYX0 476 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PRAMEF9Q5VWM5 478 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PRAMEF6Q5VXH4 476 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NCR3LG1Q68D85 454 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF470Q6ECI4 717 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 LRRC8EQ6NSJ5 796 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 AGTRAPQ6RW13 159 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 OPN5Q6U736 354 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PRSS57Q6UWY2 283 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 C4orf22Q6V702 233 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NHLRC1Q6VVB1 395 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HSDL2Q6YN16 418 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CYHR1Q6ZMK1 362 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 RFPL4BQ6ZWI9 263 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 KCTD20Q7Z5Y7 419 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 VRK2Q86Y07 508 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 IGDCC3Q8IVU1 814 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 LINC00518Q8N0U6 118 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 TMEM132CQ8N3T6 1108 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 RELL2Q8NC24 303 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 OR52B4Q8NGK2 314 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NT5CQ8TCD5 201 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 RNASE8Q8TDE3 154 aaKnown RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 GPX8Q8TED1 209 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 OIT3Q8WWZ8 545 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 KCNJ9Q92806 393 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PIGTQ969N2 578 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 SLC7A6OSQ96CW6 309 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PBKQ96KB5 322 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HIST1H2AHQ96KK5 128 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 WDFY2Q96P53 400 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 HIST1H2AJQ99878 128 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MCMBPQ9BTE3 642 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 H2AFJQ9BTM1 129 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 KIFC1Q9BW19 673 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PARD6GQ9BYG4 376 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 KCNN2Q9H2S1 579 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 UBQLN3Q9H347 655 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 GAL3ST2Q9H3Q3 398 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms