RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 NANSQ9NR45 359 aa13.23□□□□□ -0.29
POLR2J3-204ENST00000486319 YARS2Q9Y2Z4 477 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-204ENST00000486319 TRIM64BA6NI03 449 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 PRR23D1E9PI22 279 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 CEACAM4O75871 244 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 HPP00738 406 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 PTHP01270 115 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 PRR23D2P0DMB1 279 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF3P17036 446 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 EGR4Q05215 589 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 TMED1Q13445 227 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF791Q3KP31 576 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ARMC4Q5T2S8 1044 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 EML6Q6ZMW3 1958 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 CPOQ8IVL8 374 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 C10orf53Q8N6V4 93 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 LRRC17Q8N6Y2 441 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 LGALS12Q96DT0 336 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 GPX7Q96SL4 187 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 KLHDC3Q9BQ90 382 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 MND1Q9BWT6 205 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF160Q9HCG1 818 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 CHCHD3Q9NX63 227 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 PPP4R1LQ9P1A2 415 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 KLHL21Q9UJP4 597 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF229Q9UJW7 825 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 HIF3AQ9Y2N7 669 aa13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 TLN1Q9Y490 2541 aaKnown RBP13.22□□□□□ -0.29
POLR2J3-204ENST00000486319 CFAP46Q8IYW2 2715 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TRAV36DV7A0A075B6V5 113 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 IGLV3-32A0A0A0MS00 114 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TMED7-TICAM2A0A0A6YYA0 188 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 LRRN3E7EW58 273 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 MASP2O00187 686 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 MYL12BO14950 172 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 IDH3BO43837 385 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 GABARAPO95166 117 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 ATE1O95260 518 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 PDGFAP04085 211 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 ASAH2BP0C7U1 165 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 MYL12AP19105 171 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 PAICSP22234 425 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 PAX7P23759 505 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 RPL4P36578 427 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 DLX5P56178 289 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 SNTA1Q13424 505 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 LSAMPQ13449 338 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 MED22Q15528 200 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 PLBD1Q6P4A8 553 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TMEM81Q6P7N7 255 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 GALNT16Q8N428 558 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TEX19Q8NA77 164 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 PROKR2Q8NFJ6 384 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 OR10G3Q8NGC4 313 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 SECISBP2Q96T21 854 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TAPBPLQ9BX59 468 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 FKRPQ9H9S5 495 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 GALNT9Q9HCQ5 603 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 NRIP3Q9NQ35 241 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 CHRNA9Q9UGM1 479 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 SLC6A5Q9Y345 797 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 EXOSC1Q9Y3B2 195 aaKnown RBP13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TMED7Q9Y3B3 224 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 WIF1Q9Y5W5 379 aa13.21□□□□□ -0.29
POLR2J3-204ENST00000486319 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 A8MVM7 634 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 MCIDASD6RGH6 385 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 M0R082 166 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 ARPC3O15145 178 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 SUSD5O60279 629 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 MT-ATP6P00846 226 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 HIST1H2ABP04908 130 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 CELA2AP08217 269 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 ADRA2AP08913 450 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 CD36P16671 472 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 PCSK6P29122 969 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 PTGDSP41222 190 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 SOX3P41225 446 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 APOBEC1P41238 236 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 SSR4P51571 173 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 KLRB1Q12918 225 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 ITGADQ13349 1161 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 C1DQ13901 141 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 NIPAL3Q6P499 406 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 MEPCEQ7L2J0 689 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 HIST3H2AQ7L7L0 130 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 LSRQ86X29 649 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 ADGRG3Q86Y34 549 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 STK35Q8TDR2 534 aa13.2□□□□□ -0.3
POLR2J3-204ENST00000486319 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms