RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ABCA2Q9BZC7 2435 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.06□□□□□ -1.64e-10■■■■■ 26.8
CUX1-208ENST00000485792 SETD2Q9BYW2 2564 aaPredicted RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 A0A087WUJ7 227 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 A0A0B4J2E0 115 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 A0A1B0GX12 115 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 GMNCA6NCL1 334 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 A6NNC1 897 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 A8MVM7 634 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 EVPLLA8MZ36 301 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 M0QX08 132 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 ANGPT2O15123 496 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 GSC2O15499 205 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 EIF1BO60739 113 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 CCDC22O60826 627 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SHOX2O60902 331 aaPredicted RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 ZNF432O94892 652 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 HTR3BO95264 441 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 IGF2P01344 180 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 HRGP04196 525 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 THBDP07204 575 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 VIMP08670 466 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 COX5AP20674 150 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 PRDX6P30041 224 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SFTPDP35247 375 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 UGT2B10P36537 528 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 OR3A2P47893 321 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 CSNK2A1P68400 391 aaPredicted RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 HPCAP84074 193 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SLC25A3Q00325 362 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 LGALS3BPQ08380 585 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 FAM27E3Q08E93 113 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 BNIP2Q12982 314 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 CYLC2Q14093 348 aaPredicted RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 TSC22D1Q15714 1073 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 GCNT6Q5T4J0 391 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 C1QTNF12Q5T7M4 302 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 REP15Q6BDI9 236 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 PAQR6Q6TCH4 344 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 TFAP2EQ6VUC0 442 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 LINGO2Q7L985 606 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 CHMP1BQ7LBR1 199 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 NUFIP2Q7Z417 695 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 TUSC5Q8IXB3 177 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SLC15A3Q8IY34 581 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 FAM86B1Q8N7N1 296 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 ZNF614Q8N883 585 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 OR10A6Q8NH74 314 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 NFKBIDQ8NI38 313 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 ROBO4Q8WZ75 1007 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SMPDL3BQ92485 455 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 TAMM41Q96BW9 452 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 ZNF607Q96SK3 696 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 TACO1Q9BSH4 297 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 TMEM204Q9BSN7 226 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SPATA5L1Q9BVQ7 753 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 RBM24Q9BX46 236 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 PLEKHF2Q9H8W4 249 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 RASSF1Q9NS23 344 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 CMTM6Q9NX76 183 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 TMEM181Q9P2C4 612 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 MALT1Q9UDY8 824 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 MCTS1Q9ULC4 181 aaKnown RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 CORINQ9Y5Q5 1042 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 SPIN1Q9Y657 262 aaPredicted RBP5.06□□□□□ -1.6
CUX1-208ENST00000485792 ABCA1O95477 2261 aa5.06□□□□□ -1.6
CUX1-208ENST00000485792 MALRD1Q5VYJ5 2156 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 LOC100653049A0A140TA62 436 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 A0A1B0GWA3 101 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 TMEM247A6NEH6 219 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 ZNF503-AS2A6NEH8 195 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 PRORSD1PA6NEY8 169 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 TUBAL3A6NHL2 446 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 AQP7P3A6NL99 342 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 DEFB108AA8MXU0 73 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 LRRN3E7EW58 273 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 M0R3H8 397 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 SULT2B1O00204 365 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 NME4O00746 187 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 MRASO14807 208 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 KLF4O43474 513 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 SERPINB7O75635 380 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 KRT34O76011 436 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 VAMP5O95183 116 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 ATE1O95260 518 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 NUDT14O95848 222 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 FESP07332 822 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 COX4I1P13073 169 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 PPP3CBP16298 524 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 CRYGSP22914 178 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 AQP1P29972 269 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 RYKP34925 604 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 KIR2DL3P43628 341 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 SIRPAP78324 504 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 SLC35A1P78382 337 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 TLE4Q04727 773 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 LTBQ06643 244 aa5.05□□□□□ -1.6
CUX1-208ENST00000485792 RASGEF1BQ0VAM2 473 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms