RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RASGEF1BQ0VAM2 473 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 ABLIM2Q6H8Q1 611 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 SLC46A3Q7Z3Q1 461 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 BPIFA2Q96DR5 249 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 SGTBQ96EQ0 304 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 FAM46AQ96IP4 442 aaKnown RBP15.91■□□□□ 0.14
CPNE1-224ENST00000483359 PSD2Q9BQI7 771 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 NAA11Q9BSU3 229 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-224ENST00000483359 ASPNQ9BXN1 380 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 YY1AP1Q9H869 796 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 RNF6Q9Y252 685 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 AP4S1Q9Y587 144 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 TENM4Q6N022 2769 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 DIDO1Q9BTC0 2240 aaKnown RBP15.9■□□□□ 0.14
CPNE1-224ENST00000483359 AQP7P3A6NL99 342 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 CYTIPO60759 359 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 RCBTB2O95199 551 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 SAGP10523 405 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-224ENST00000483359 MAKP20794 623 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 BMP5P22003 454 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 RIPPLY2Q5TAB7 128 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 TUSC5Q8IXB3 177 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 PAPD5Q8NDF8 572 aaKnown RBP15.9■□□□□ 0.14
CPNE1-224ENST00000483359 SDCCAG3Q96C92 435 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 TMCC3Q9ULS5 477 aa15.9■□□□□ 0.14
CPNE1-224ENST00000483359 SH3PXD2BA1X283 911 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 OR10H3O60404 316 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 SERPINI2O75830 405 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 KRT36O76013 467 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 MT-ATP6P00846 226 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 RNF224P0DH78 156 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 CEACAM8P31997 349 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 SRSF1Q07955 248 aaKnown RBP eCLIP15.89■□□□□ 0.133e-6■□□□□ 9.1
CPNE1-224ENST00000483359 TMEM225Q6GV28 225 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 OR2A2Q6IF42 318 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 MAMDC2Q7Z304 686 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 PIGXQ8TBF5 258 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 FUZQ9BT04 418 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 FKRPQ9H9S5 495 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 CHST11Q9NPF2 352 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 KLHL9Q9P2J3 617 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 PCNX1Q96RV3 2341 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 OR7A10O76100 309 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 AHCYP23526 432 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 LIMS1P48059 325 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 P2RY4P51582 365 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 PMS2P3Q13401 168 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 RNPS1Q15287 305 aaKnown RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 MTFR2Q6P444 385 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 RNF113BQ8IZP6 322 aaKnown RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 SLC43A2Q8N370 569 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 OR9Q2Q8NGE9 314 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 GMPPAQ96IJ6 420 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 C12orf49Q9H741 205 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 COQ3Q9NZJ6 369 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 ZNF229Q9UJW7 825 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 ING1Q9UK53 422 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-224ENST00000483359 CORINQ9Y5Q5 1042 aa15.89■□□□□ 0.13
CPNE1-224ENST00000483359 A0A1W2PNV4 684 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 ZNF716A6NP11 495 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 HSPB2A8KAH6 182 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 C11orf98E9PRG8 122 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 E2F6O75461 281 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 HOXB6P17509 224 aaKnown RBP15.88■□□□□ 0.13
CPNE1-224ENST00000483359 PRKCDQ05655 676 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 MFSD13AQ14CX5 517 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 HSPB2Q16082 182 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 GTF2IRD2BQ6EKJ0 949 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 H1FNTQ75WM6 255 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-224ENST00000483359 ZNF771Q7L3S4 317 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-224ENST00000483359 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.88■□□□□ 0.13
CPNE1-224ENST00000483359 NANOGNBQ7Z5D8 188 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 GTF2IRD2Q86UP8 949 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 OR4C15Q8NGM1 316 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 OR5J2Q8NH18 312 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 OR6S1Q8NH40 331 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 ARMC1Q9NVT9 282 aa15.88■□□□□ 0.13
CPNE1-224ENST00000483359 HELZ2Q9BYK8 2649 aaKnown RBP15.88■□□□□ 0.13
CPNE1-224ENST00000483359 TRAV27A0A087WT01 109 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 EFCAB9A8MZ26 197 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 BLOC1S5-TXNDC5H3BN57 136 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 CDC42EP2O14613 210 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 CLOCKO15516 846 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 HIST1H2ABP04908 130 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 ASAH2BP0C7U1 165 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 ADORA3P0DMS8 318 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 AGTR1P30556 359 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 CTBP2P56545 445 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 CDSNQ15517 529 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 HIST3H2AQ7L7L0 130 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 MRGPRGQ86SM5 289 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 LIX1LQ8IVB5 337 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 CDK20Q8IZL9 346 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 OR13C2Q8NGS9 318 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 LRTOMTQ8WZ04 291 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 HIST1H2ACQ93077 130 aa15.87■□□□□ 0.13
CPNE1-224ENST00000483359 DUS3LQ96G46 650 aaKnown RBP15.87■□□□□ 0.13
CPNE1-224ENST00000483359 GCN1Q92616 2671 aaKnown RBP15.87■□□□□ 0.13
CPNE1-224ENST00000483359 FAM90A27PA6NNH2 459 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms