RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 B3GALT5Q9Y2C3 310 aa17.58■□□□□ 0.4
LIME1-205ENST00000480139 A0A1W2PRQ8 180 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 GPR171O14626 319 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 MSTNO14793 375 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 CGAP01215 116 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 ASCL1P50553 236 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 UGT2B15P54855 530 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 DGCR6Q14129 220 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 SLC17A1Q14916 467 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 ZNF74Q16587 644 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 TMEM201Q5SNT2 666 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 VWA1Q6PCB0 445 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 CCDC103Q8IW40 242 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 TUSC5Q8IXB3 177 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 ZNF347Q96SE7 839 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 FKRPQ9H9S5 495 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 PLSCR4Q9NRQ2 329 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 RHCGQ9UBD6 479 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 CLEC4AQ9UMR7 237 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 RASD1Q9Y272 281 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 MED31Q9Y3C7 131 aa17.57■□□□□ 0.4
LIME1-205ENST00000480139 FAM90A27PA6NNH2 459 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 RAMP1O60894 148 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 CLDN1O95832 211 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 H1F0P07305 194 aaKnown RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 UMPSP11172 480 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 GRPRP30550 384 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 SIRPAP78324 504 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 LTBQ06643 244 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 TFF3Q07654 80 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 POU4F3Q15319 338 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 FAM98BQ52LJ0 330 aaKnown RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 H1FNTQ75WM6 255 aaPredicted RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 MAMDC2Q7Z304 686 aaPredicted RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 BTLAQ7Z6A9 289 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 ZDHHC21Q8IVQ6 265 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 RNF113BQ8IZP6 322 aaKnown RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 ACOT11Q8WXI4 607 aaPredicted RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 MOGAT1Q96PD6 335 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 SEPHS2Q99611 448 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 ASPNQ9BXN1 380 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 UCK2Q9BZX2 261 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 CHST11Q9NPF2 352 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 MRPL39Q9NYK5 338 aaKnown RBP17.56■□□□□ 0.4
LIME1-205ENST00000480139 ZNF229Q9UJW7 825 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 BAHCC1Q9P281 2608 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 DOPEY2Q9Y3R5 2298 aa17.56■□□□□ 0.4
LIME1-205ENST00000480139 HCFC1P51610 2035 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 LOC102725191A0A1B0GVB3 256 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 NKX2-6A6NCS4 301 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 ENO4A6NNW6 628 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 A8MXE2 369 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 M0R082 166 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 KPNA4O00629 521 aaPredicted RBP17.55■□□□□ 0.4
LIME1-205ENST00000480139 PTNP21246 168 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 FUT4P22083 530 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 PCYT1AP49585 367 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 SMIM11AP58511 58 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 CHRNB3Q05901 458 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 TMEM225Q6GV28 225 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 YTHDF3Q7Z739 585 aaKnown RBP17.55■□□□□ 0.4
LIME1-205ENST00000480139 ZNF417Q8TAU3 575 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 SLC7A13Q8TCU3 470 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 LIPHQ8WWY8 451 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 LRRC46Q96FV0 321 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 ZNF587Q96SQ5 575 aaPredicted RBP17.55■□□□□ 0.4
LIME1-205ENST00000480139 FOXD3Q9UJU5 478 aaPredicted RBP17.55■□□□□ 0.4
LIME1-205ENST00000480139 PROCRQ9UNN8 238 aa17.55■□□□□ 0.4
LIME1-205ENST00000480139 PTPN13Q12923 2485 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 TCRBV3S1A0A5B6 114 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 DHRS12A0PJE2 317 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 EEF1E1-BLOC1S5C9J1V9 151 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 EEF1E1O43324 174 aaKnown RBP17.54■□□□□ 0.4
LIME1-205ENST00000480139 DIRAS1O95057 198 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 ASAH2BP0C7U1 165 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 RAP2AP10114 183 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 GABPB1Q06547 395 aaPredicted RBP17.54■□□□□ 0.4
LIME1-205ENST00000480139 MBOAT2Q6ZWT7 520 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 SLC46A3Q7Z3Q1 461 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 GALNT5Q7Z7M9 940 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 ADGRG5Q8IZF4 528 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 C10orf53Q8N6V4 93 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 OR9K2Q8NGE7 335 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 PFN4Q8NHR9 129 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 FUZQ9BT04 418 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 FANCFQ9NPI8 374 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 NANSQ9NR45 359 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 C6orf203Q9P0P8 240 aaPredicted RBP17.54■□□□□ 0.4
LIME1-205ENST00000480139 SEC14L4Q9UDX3 406 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 FLVCR1Q9Y5Y0 555 aa17.54■□□□□ 0.4
LIME1-205ENST00000480139 COL12A1Q99715 3063 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 A0A087WUU8 490 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 LRRN3E7EW58 273 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 SMNDC1O75940 238 aaKnown RBP eCLIP17.53■□□□□ 0.4
LIME1-205ENST00000480139 CH25HO95992 272 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 PRKCDQ05655 676 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 ZNF730Q6ZMV8 503 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 NUFIP2Q7Z417 695 aaKnown RBP17.53■□□□□ 0.4
LIME1-205ENST00000480139 OR5J2Q8NH18 312 aa17.53■□□□□ 0.4
LIME1-205ENST00000480139 RNASE6Q93091 150 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms