RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OR9A4Q8NGU2 314 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 MAIP1Q8WWC4 291 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 TRUB1Q8WWH5 349 aaKnown RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 IL1F10Q8WWZ1 152 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 ST8SIA1Q92185 356 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 SLC6A7Q99884 636 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 OR51J1Q9H342 316 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 CAB39LQ9H9S4 337 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 KLHL28Q9NXS3 571 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 CD274Q9NZQ7 290 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 POLDIP2Q9Y2S7 368 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 PHLPP2Q6ZVD8 1323 aa4.1□□□□□ -1.75
SMC5-203ENST00000475540 RPAP1Q9BWH6 1393 aaPredicted RBP4.1□□□□□ -1.75
SMC5-203ENST00000475540 IGHV7-81A0A0B4J1V7 117 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 SMCO3A2RU48 225 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 GPX5O75715 221 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 CLDN9O95484 217 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 TIMP1P01033 207 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 XRCC1P18887 633 aaPredicted RBP4.09□□□□□ -1.75
SMC5-203ENST00000475540 IMPDH1P20839 514 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 MMP11P24347 488 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 NTSP30990 170 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 FDFT1P37268 417 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 RPL13AP40429 203 aaKnown RBP4.09□□□□□ -1.75
SMC5-203ENST00000475540 CDKN1BP46527 198 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 GYG1P46976 350 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 CARD18P57730 90 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 TLE4Q04727 773 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 RGS1Q08116 209 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 MERTKQ12866 999 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 STK11Q15831 433 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 AANATQ16613 207 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 PIP5KL1Q5T9C9 394 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 OR8G2PQ6IF36 304 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 Q6P435 159 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 HSD11B1LQ7Z5J1 315 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 KATNAL2Q8IYT4 538 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 OFCC1Q8IZS5 231 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 CCDC71LQ8N9Z2 235 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 DCAF4L2Q8NA75 395 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 OR8K3Q8NH51 312 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 AENQ8WTP8 325 aaKnown RBP4.09□□□□□ -1.75
SMC5-203ENST00000475540 FAM104AQ969W3 186 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 SLC38A2Q96QD8 506 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 DUSP16Q9BY84 665 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 NXF5Q9H1B4 397 aaKnown RBP4.09□□□□□ -1.75
SMC5-203ENST00000475540 SUDS3Q9H7L9 328 aaPredicted RBP4.09□□□□□ -1.75
SMC5-203ENST00000475540 ZNF160Q9HCG1 818 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 GCNT4Q9P109 453 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 IKZF2Q9UKS7 526 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 MEMO1Q9Y316 297 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 TIMM10BQ9Y5J6 103 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 ALG6Q9Y672 507 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 FRMPD4Q14CM0 1322 aa4.09□□□□□ -1.75
SMC5-203ENST00000475540 SMIM28A0A1B0GU29 152 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 LINC00854A0A1B0GVQ3 168 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 LRP5LA4QPB2 252 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 OR2AG2A6NM03 316 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 SUPT3HB4E1H0 165 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 TAPBPO15533 448 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 FTH1P02794 183 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 ETS2P15036 469 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 BMI1P35226 326 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 UGT1A5P35504 534 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 CRYBB2P43320 205 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 BDKRB1P46663 353 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 CD151P48509 253 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 STARP49675 285 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 NOVA1P51513 510 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 ATP1B3P54709 279 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 RPL8P62917 257 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 TMEM94Q12767 1356 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 C1orf61Q13536 156 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 FBXO48Q5FWF7 155 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 FAM120AOSQ5T036 256 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 CYS1Q717R9 158 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 APTXQ7Z2E3 356 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 CLEC4FQ8N1N0 589 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 DHRSXQ8N5I4 330 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 CNIH3Q8TBE1 160 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 EFHD2Q96C19 240 aaPredicted RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 PANX1Q96RD7 426 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 TGS1Q96RS0 853 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 DNTTIP1Q9H147 329 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 GEMIN7Q9H840 131 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 SLC17A5Q9NRA2 495 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 PEF1Q9UBV8 284 aaKnown RBP4.08□□□□□ -1.76
SMC5-203ENST00000475540 COMMD3-BMI1R4GMX3 469 aa4.08□□□□□ -1.76
SMC5-203ENST00000475540 TUBAL3A6NHL2 446 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 OR6C65A6NJZ3 312 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 NDUFS8O00217 210 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 HAS3O00219 553 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 LSM1O15116 133 aaKnown RBP4.07□□□□□ -1.76
SMC5-203ENST00000475540 FLOT1O75955 427 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 PAHP00439 452 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CST1P01037 141 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 ALOX5P09917 674 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 IGLL1P15814 213 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 CCNE1P24864 410 aa4.07□□□□□ -1.76
SMC5-203ENST00000475540 ATP5A1P25705 553 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms