RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IQANK1A0A1B0GTG1 560 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 PCP4L1A6NKN8 68 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 C12orf71A8MTZ7 269 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 A8MXQ7 604 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 XPO1O14980 1071 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 RIPK2O43353 540 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 MED7O43513 233 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 HNRNPA2B1P22626 353 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 PSMA5P28066 241 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 LAP3P28838 519 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 VDAC2P45880 294 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 LHX2P50458 406 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 KLHL38Q2WGJ6 581 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 COA6Q5JTJ3 125 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 Q6ZPB1 254 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 RFLNAQ6ZTI6 216 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 PLA2G4DQ86XP0 818 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 GPATCH11Q8N954 259 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 FNDC5Q8NAU1 212 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 DUSP18Q8NEJ0 188 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 OR4K14Q8NGD5 310 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 OR9G1Q8NH87 305 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 FANK1Q8TC84 345 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 ACOT11Q8WXI4 607 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 EMG1Q92979 244 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 TMEM246Q9BRR3 403 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 RIOK2Q9BVS4 552 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 LRRN3Q9H3W5 708 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 RMND5AQ9H871 391 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 LIN28AQ9H9Z2 209 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 PATZ1Q9HBE1 687 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 ZNF226Q9NYT6 803 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 BFARQ9NZS9 450 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 ZNF223Q9UK11 482 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 STAP1Q9ULZ2 295 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 PSG11Q9UQ72 335 aa2.03□□□□□ -2.08
ECHDC1-213ENST00000474240 COL4A4P53420 1690 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 K7EQM0 130 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PRKAB2O43741 272 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 SMPD2O60906 423 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF44P15621 663 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 UQCRC2P22695 453 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 GRIA1P42261 906 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 POLR2FP61218 127 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PAX5Q02548 391 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ELP6Q0PNE2 266 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 VGLL4Q14135 290 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 GRB7Q14451 532 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PDK3Q15120 406 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 UBE2SQ16763 222 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 EXOC3L2Q2M3D2 409 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 RFX4Q33E94 735 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 C10orf120Q5SQS8 335 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ATAD3BQ5T9A4 648 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 GPR157Q5UAW9 335 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 CTRB2Q6GPI1 263 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PGAP1Q75T13 922 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC26A11Q86WA9 606 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PAQR7Q86WK9 346 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 TEX9Q8N6V9 391 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ARPC1AQ92747 370 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 UBE2E3Q969T4 207 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 RAB7BQ96AH8 199 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 RPUSD4Q96CM3 377 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 CXorf40BQ96DE9 158 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 DTNBP1Q96EV8 351 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 RNF185Q96GF1 192 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ITCHQ96J02 903 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 ZNF607Q96SK3 696 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 SLC39A3Q9BRY0 314 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 NAT9Q9BTE0 207 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 PARD6BQ9BYG5 372 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 DEFB127Q9H1M4 99 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 GBA3Q9H227 469 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 MRPL47Q9HD33 250 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 LHX9Q9NQ69 397 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 QPCTLQ9NXS2 382 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 SH3BGRL2Q9UJC5 107 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 TP53TG5Q9Y2B4 290 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 LTBP1Q14766 1721 aa2.02□□□□□ -2.09
ECHDC1-213ENST00000474240 RPAP1Q9BWH6 1393 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 PLEKHH1Q9ULM0 1364 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 IGKV1D-8A0A087WSZ0 117 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 H3BNH8 94 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 GOLGA8SH3BPF8 625 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 TMX2-CTNND1H3BSU7 103 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 PEX7O00628 323 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 ARPC3O15145 178 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 RGS16O15492 202 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 SPAG7O75391 227 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 NPR2P20594 1047 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 MAGP20916 626 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 GNA11P29992 359 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 HOXA9P31269 272 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 DDOSTP39656 456 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 NMUP48645 174 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 KLRB1Q12918 225 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 C1orf61Q13536 156 aa2.01□□□□□ -2.09
ECHDC1-213ENST00000474240 OXA1LQ15070 435 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms