RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CXorf36Q9H7Y0 433 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 OBP2BQ9NPH6 170 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 YAE1D1Q9NRH1 226 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 SERINC1Q9NRX5 453 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 CBLN4Q9NTU7 201 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 ACSS1Q9NUB1 689 aaPredicted RBP3.09□□□□□ -1.91
XRN1-209ENST00000472625 SERTAD4Q9NUC0 356 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 MED17Q9NVC6 651 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 TAS2R16Q9NYV7 291 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 CISD1Q9NZ45 108 aaKnown RBP3.09□□□□□ -1.91
XRN1-209ENST00000472625 GRHL1Q9NZI5 618 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 MED11Q9P086 117 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 PRDM4Q9UKN5 801 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 FAF1Q9UNN5 650 aaPredicted RBP3.09□□□□□ -1.91
XRN1-209ENST00000472625 LIPT1Q9Y234 373 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 ZANQ9Y493 2812 aa3.09□□□□□ -1.92
XRN1-209ENST00000472625 CIB4A0PJX0 185 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 OR5H1A6NKK0 313 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 DUXAA6NLW8 204 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TRIM49D1C9J1S8 452 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GTPBP1O00178 669 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 SLC28A1O00337 649 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ABCD4O14678 606 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CXCL13O43927 109 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 EIF4E2O60573 245 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 EIF1BO60739 113 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 TBX19O60806 448 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GLRA3O75311 464 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PROP1O75360 226 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GCM2O75603 506 aaPredicted RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 LYPLA1O75608 230 aaPredicted RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 PIAS1O75925 651 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PDE5AO76074 875 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 OR4F21O95013 312 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 NKX2-2O95096 273 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 IGHV4-39P01824 125 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GRPP07492 148 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SOD3P08294 240 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 VIMP08670 466 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 LINGO3P0C6S8 592 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 KITP10721 976 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 UROSP10746 265 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 MYL2P10916 166 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 UBL4AP11441 157 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TSPAN8P19075 237 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 IMPDH1P20839 514 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 DRD4P21917 467 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 USF1P22415 310 aaPredicted RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 PRPH2P23942 346 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PPIFP30405 207 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 CASQ1P31415 396 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TTKP33981 857 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GABRA3P34903 492 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SFTPDP35247 375 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ACVR1BP36896 505 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SERPINB5P36952 375 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 HSD17B3P37058 310 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CDKN1AP38936 164 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 HTR3AP46098 478 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 OR3A2P47893 321 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SLC6A8P48029 635 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CCT5P48643 541 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CLK1P49759 484 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 P2RX1P51575 399 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 EFNA4P52798 201 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PRKAA2P54646 552 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CDH13P55290 713 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TXNL4AP83876 142 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 GUCY2DQ02846 1103 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 C2orf80Q0P641 193 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 HSPB3Q12988 150 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GNA13Q14344 377 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 MLC1Q15049 377 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PDK3Q15120 406 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CNN3Q15417 329 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 TAB1Q15750 504 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CTU2Q2VPK5 515 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 GRAMD1BQ3KR37 738 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CCDC153Q494R4 210 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TEX35Q5T0J7 233 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 FAM71E1Q6IPT2 247 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 MFSD12Q6NUT3 480 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ZDHHC24Q6UX98 284 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TIFABQ6ZNK6 161 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 DNM1P46Q6ZS02 220 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 AMIGO2Q86SJ2 522 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 MARCH3Q86UD3 253 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ZNF100Q8IYN0 542 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 UBE2J2Q8N2K1 259 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 RFLNBQ8N5W9 214 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TMCO5AQ8N6Q1 288 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 KBTBD8Q8NFY9 601 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 OR4N2Q8NGD1 307 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PIGXQ8TBF5 258 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SFXN5Q8TD22 340 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ABHD3Q8WU67 409 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ZFAND2BQ8WV99 257 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 DDB2Q92466 427 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms