RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 USP22Q9UPT9 525 aa13.32□□□□□ -0.28
CALD1-215ENST00000472096 PRRC2AP48634 2157 aaKnown RBP13.32□□□□□ -0.28
CALD1-215ENST00000472096 DSCAMO60469 2012 aa13.32□□□□□ -0.28
CALD1-215ENST00000472096 IGKV1D-42A0A075B6H8 117 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 LCE2BO14633 110 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 FMO6PO60774 539 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 LYZL6O75951 148 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 IGHV3-9P01782 118 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 DRD4P21917 467 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
CALD1-215ENST00000472096 OR1Q1Q15612 314 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 NPTX1Q15818 432 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 ULK3Q6PHR2 472 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 C5orf46Q6UWT4 87 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
CALD1-215ENST00000472096 TREML1Q86YW5 311 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 LURAP1LQ8IV03 231 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 OR9K2Q8NGE7 335 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 OR6T1Q8NGN1 323 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 MFSD8Q8NHS3 518 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 SLC26A7Q8TE54 656 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 SLC38A4Q969I6 547 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 TMEM45BQ96B21 275 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 KTI12Q96EK9 354 aaPredicted RBP13.31□□□□□ -0.28
CALD1-215ENST00000472096 ZNF583Q96ND8 569 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
CALD1-215ENST00000472096 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 MALT1Q9UDY8 824 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 PLEKHA6Q9Y2H5 1048 aa13.31□□□□□ -0.28
CALD1-215ENST00000472096 A0A087WUJ7 227 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.3□□□□□ -0.28
CALD1-215ENST00000472096 CCT8L1PA6NM43 557 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 SNX3O60493 162 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 MRPL33O75394 65 aaKnown RBP13.3□□□□□ -0.28
CALD1-215ENST00000472096 IST1P53990 364 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 GYS2P54840 703 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 VEZF1Q14119 521 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 TESK1Q15569 626 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 BEX5Q5H9J7 111 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 FBXW9Q5XUX1 488 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 ARPINQ7Z6K5 226 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 WFDC8Q8IUA0 241 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 UBE2J2Q8N2K1 259 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 VANGL1Q8TAA9 524 aaPredicted RBP13.3□□□□□ -0.28
CALD1-215ENST00000472096 RASSF5Q8WWW0 418 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 SLC25A36Q96CQ1 311 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 SLC47A1Q96FL8 570 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 MCHR1Q99705 422 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 MYLK2Q9H1R3 596 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 SELENONQ9NZV5 590 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 ROS1P08922 2347 aa13.3□□□□□ -0.28
CALD1-215ENST00000472096 AIM2O14862 343 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 KLF4O43474 513 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 RAF1P04049 648 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 GTF2E2P29084 291 aaKnown RBP13.29□□□□□ -0.28
CALD1-215ENST00000472096 CDH12P55289 794 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 GNGT1P63211 74 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 TAB1Q15750 504 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 FAM69AQ5T7M9 428 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 ZNF613Q6PF04 617 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 SEZ6L2Q6UXD5 910 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 GPAT4Q86UL3 456 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 RBM45Q8IUH3 476 aaKnown RBP13.29□□□□□ -0.28
CALD1-215ENST00000472096 P3H2Q8IVL5 708 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 ZNF433Q8N7K0 673 aaPredicted RBP13.29□□□□□ -0.28
CALD1-215ENST00000472096 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 OR2T12Q8NG77 320 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 ZNF385AQ96PM9 386 aaKnown RBP13.29□□□□□ -0.28
CALD1-215ENST00000472096 CMTM6Q9NX76 183 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 EDARQ9UNE0 448 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 RASD1Q9Y272 281 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 CADP27708 2225 aa13.29□□□□□ -0.28
CALD1-215ENST00000472096 TRAV36DV7A0A075B6V5 113 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 GMNCA6NCL1 334 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 CPSF4LA6NMK7 179 aaKnown RBP13.28□□□□□ -0.28
CALD1-215ENST00000472096 CHP2O43745 196 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 OR2T1O43869 369 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 VAMP5O95183 116 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 ATE1O95260 518 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 PTNP21246 168 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 DNASE1P24855 282 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 ENTPD8Q5MY95 495 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 C8orf82Q6P1X6 216 aaPredicted RBP13.28□□□□□ -0.28
CALD1-215ENST00000472096 HACD2Q6Y1H2 254 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 TSPYL5Q86VY4 417 aaPredicted RBP13.28□□□□□ -0.28
CALD1-215ENST00000472096 MICU2Q8IYU8 434 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 EPYCQ99645 322 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 CCM2LQ9NUG4 571 aaPredicted RBP13.28□□□□□ -0.28
CALD1-215ENST00000472096 PARPBPQ9NWS1 579 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 ASB6Q9NWX5 421 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 TAS2R16Q9NYV7 291 aa13.28□□□□□ -0.28
CALD1-215ENST00000472096 GMPR2Q9P2T1 348 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms