RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 EPHA2P29317 976 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 AQP2P41181 271 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 AQP4P55087 323 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 COX10Q12887 443 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 ZBED5Q49AG3 693 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 Q6ZPB1 254 aaPredicted RBP17.2■□□□□ 0.34
PSPC1-203ENST00000471658 RASSF6Q6ZTQ3 369 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 GHDCQ8N2G8 530 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 KDM8Q8N371 416 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 MEIOBQ8N635 442 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 PACRGLQ8N7B6 248 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 UCN2Q96RP3 112 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 MBOAT4Q96T53 435 aa17.2■□□□□ 0.34
PSPC1-203ENST00000471658 TACO1Q9BSH4 297 aaKnown RBP17.2■□□□□ 0.34
PSPC1-203ENST00000471658 HTR3EA5X5Y0 456 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 HIST1H2ABP04908 130 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 OSMP13725 252 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 GSTM3P21266 225 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 POU1F1P28069 291 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 SLC36A3Q495N2 470 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 KRTCAP3Q53RY4 240 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 ARHGAP11AQ6P4F7 1023 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 THSD4Q6ZMP0 1018 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 HIST3H2AQ7L7L0 130 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 IGFN1Q86VF2 1251 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 CCDC103Q8IW40 242 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 OR8D4Q8NGM9 314 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 OR5J2Q8NH18 312 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 HIST1H2ACQ93077 130 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 SAMD8Q96LT4 415 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 SLX1AQ9BQ83 275 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 TOR3AQ9H497 397 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 RIBC2Q9H4K1 309 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 ALKBH4Q9NXW9 302 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 TAS2R5Q9NYW4 299 aa17.19■□□□□ 0.34
PSPC1-203ENST00000471658 PLPP3O14495 311 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 ENPP1P22413 925 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 SLC9A3P48764 834 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 P2RY4P51582 365 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 RAC3P60763 192 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 SLC35A1P78382 337 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 PMS2P3Q13401 168 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 IZUMO2Q6UXV1 221 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 ZNF620Q6ZNG0 422 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 NANOGNBQ7Z5D8 188 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 ROBO4Q8WZ75 1007 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 TUBA1CQ9BQE3 449 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 ASPNQ9BXN1 380 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 PRDM14Q9GZV8 571 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 OR52D1Q9H346 318 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 PNPLA3Q9NST1 481 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 MRPL39Q9NYK5 338 aaKnown RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 KDM4EB2RXH2 506 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 C11orf98E9PRG8 122 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 MS4A18H0YCH9 400 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 H3BN98 237 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 FZD7O75084 574 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 GTF2E2P29084 291 aaKnown RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 UQCRC1P31930 480 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 NUP107P57740 925 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 RPS4XP62701 263 aaKnown RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 CSNK2A1P68400 391 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 RPL18Q07020 188 aaKnown RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 MFSD13AQ14CX5 517 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 SGCBQ16585 318 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 MS4A18Q3C1V0 323 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 PDSS1Q5T2R2 415 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 TMEM236Q5W0B7 351 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 H1FNTQ75WM6 255 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 PARP8Q8N3A8 854 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 FANK1Q8TC84 345 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 SARAFQ96BY9 339 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 VCX3BQ9H321 246 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 CHST11Q9NPF2 352 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 SMPD3Q9NY59 655 aaPredicted RBP17.18■□□□□ 0.34
PSPC1-203ENST00000471658 HIF3AQ9Y2N7 669 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 CORINQ9Y5Q5 1042 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 CDH10Q9Y6N8 788 aa17.18■□□□□ 0.34
PSPC1-203ENST00000471658 EPG5Q9HCE0 2579 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 SMAD9O15198 467 aaKnown RBP17.17■□□□□ 0.34
PSPC1-203ENST00000471658 ATXN7O15265 892 aaPredicted RBP17.17■□□□□ 0.34
PSPC1-203ENST00000471658 F13BP05160 661 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 TSPAN19P0C672 248 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 ADORA3P0DMS8 318 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 PTGS2P35354 604 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 AGFG1P52594 562 aaKnown RBP17.17■□□□□ 0.34
PSPC1-203ENST00000471658 CRISP1P54107 249 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 RAD23AP54725 363 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 H3F3AP84243 136 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 CLEC12AQ5QGZ9 265 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 SMARCD3Q6STE5 483 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 IQCF1Q8N6M8 205 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 LRRC75AQ8NAA5 344 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 DNAJC9Q8WXX5 260 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 VCXQ9H320 206 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 C8orf4Q9NR00 106 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 IL20Q9NYY1 176 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 KLHL13Q9P2N7 655 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 ORC6Q9Y5N6 252 aa17.17■□□□□ 0.34
PSPC1-203ENST00000471658 MCIDASD6RGH6 385 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms