RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 EXOSC3Q9NQT5 275 aaKnown RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 PAQR5Q9NXK6 330 aaPredicted RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 FLRT3Q9NZU0 649 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 PRDM4Q9UKN5 801 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 EMC9Q9Y3B6 208 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 CHST2Q9Y4C5 530 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ENPP4Q9Y6X5 453 aa8.08□□□□□ -1.12
SF3A1-206ENST00000471037 ANK3Q12955 4377 aaKnown RBP8.08□□□□□ -1.12
SF3A1-206ENST00000471037 CLDN24A6NM45 220 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 M0R3H8 397 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 GTPBP1O00178 669 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 AP3D1O14617 1153 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF264O43296 627 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 NDUFB5O43674 189 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 EIF4E2O60573 245 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 FMO6PO60774 539 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 TIPRLO75663 272 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ATP6V1G2O95670 118 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ANGPTL1O95841 491 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PLAUP00749 431 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 UBTFL6P0CB48 400 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 UQCRBP14927 111 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 RHCEP18577 417 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 TNFRSF1BP20333 461 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PSMB1P20618 241 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 FASP25445 335 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 OR1E2P47887 323 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 SLC6A8P48029 635 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 SUMO3P55854 103 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 C17orf67Q0P5P2 114 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 TNK1Q13470 666 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 CD226Q15762 336 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ETFDHQ16134 617 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 SGCBQ16585 318 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 EXOC3L2Q2M3D2 409 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 CTU2Q2VPK5 515 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ADAM5Q6NVV9 412 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 APOOLQ6UXV4 268 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 MARCH3Q86UD3 253 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 COMTD1Q86VU5 262 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 RANBP3LQ86VV4 465 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 CYP4Z1Q86W10 505 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PQLC1Q8N2U9 271 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 TOR1AIP2Q8NFQ8 470 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 OR6T1Q8NGN1 323 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PHOSPHO1Q8TCT1 267 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PLPPR2Q96GM1 343 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF300Q96RE9 604 aaPredicted RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 ZNF347Q96SE7 839 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 POLR2J2Q9GZM3 115 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 LAT2Q9GZY6 243 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 POLR2J3Q9H1A7 115 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 GLRX2Q9NS18 164 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 RLIMQ9NVW2 624 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 NDUFAF4Q9P032 175 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 STOML1Q9UBI4 398 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 TESQ9UGI8 421 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
SF3A1-206ENST00000471037 STAB1Q9NY15 2570 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 PCNX3Q9H6A9 2034 aa8.07□□□□□ -1.12
SF3A1-206ENST00000471037 A0A087WZY1 265 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 C7orf72A4D263 438 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 hCG_2039718K7EN88 272 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 OVOL3O00110 214 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 FAAHO00519 579 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 EIF1AYO14602 144 aaKnown RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 ADAMDEC1O15204 470 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 BAG2O95816 211 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 PLGP00747 810 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 CST1P01037 141 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 MT-ND1P03886 318 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 ANPEPP15144 967 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 IFNA8P32881 189 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 EIF1AXP47813 144 aaKnown RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 CTBP2P56545 445 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 RPS4XP62701 263 aaKnown RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 PLAURQ03405 335 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 SKP2Q13309 424 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 GK3PQ14409 553 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 ATP6AP1Q15904 470 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 IQCCQ4KMZ1 466 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 OR2T5Q6IEZ7 315 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 DEF8Q6ZN54 512 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 GTPBP8Q8N3Z3 284 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 GATSQ8NAP1 163 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 OR4D11Q8NGI4 311 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 OR2T29Q8NH02 315 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 OR10D3Q8NH80 312 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 VANGL1Q8TAA9 524 aaPredicted RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 CNOT9Q92600 299 aaKnown RBP8.06□□□□□ -1.12
SF3A1-206ENST00000471037 PRRC1Q96M27 445 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 PRRG4Q9BZD6 226 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 ACTR6Q9GZN1 396 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 RASSF4Q9H2L5 321 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
SF3A1-206ENST00000471037 MCTS1Q9ULC4 181 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms