RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 AURKBQ96GD4 344 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CCT8L2Q96SF2 557 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 RBM4BQ9BQ04 359 aaKnown RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SYT3Q9BQG1 590 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 KATNB1Q9BVA0 655 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SHCBP1LQ9BZQ2 653 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 VPS11Q9H270 941 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 ZNF665Q9H7R5 613 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 C3orf14Q9HBI5 128 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 NOX3Q9HBY0 568 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 GCM1Q9NP62 436 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 DYNLRB1Q9NP97 96 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 MMP26Q9NRE1 261 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CTPS2Q9NRF8 586 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 TAS2R7Q9NYW3 318 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CRNNQ9UBG3 495 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-209ENST00000469511 UPB1Q9UBR1 384 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 CACNG2Q9Y698 323 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 TANC2Q9HCD6 1990 aa4.5□□□□□ -1.69
PTPN4-209ENST00000469511 RYR2Q92736 4967 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 IGHV3OR16-10A0A075B7F0 116 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 IGHV2OR16-5A0A0B4J2B6 119 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 A8MT66 165 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TRIM49D1C9J1S8 452 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 STX16-NPEPL1H3BU86 382 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 KIF2AO00139 706 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GTPBP1O00178 669 aaKnown RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 STX16O14662 325 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 AKAP10O43572 662 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 UPK3AO75631 287 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CYP7B1O75881 506 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GPANK1O95872 356 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CRYAAP02489 173 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TFP02787 698 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 HPGDP15428 266 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 ACHEP22303 614 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MPGP29372 298 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SLC1A3P43003 542 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 OR2B6P58173 313 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 POU6F2P78424 691 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 IL13RA1P78552 427 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 LCN2P80188 198 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 H3F3AP84243 136 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GUCY2DQ02846 1103 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 ACSM2AQ08AH3 577 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MERTKQ12866 999 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 BAMBIQ13145 260 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SNTB2Q13425 540 aaKnown RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 LASP1Q14847 261 aaKnown RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SLC17A1Q14916 467 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 FAM83EQ2M2I3 478 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 BEAN1Q3B7T3 259 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SYT14P1Q58G82 188 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 ACSM2BQ68CK6 577 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 C11orf87Q6NUJ2 197 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 C3orf33Q6P1S2 294 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 UGT2A3Q6UWM9 527 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CCBE1Q6UXH8 406 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 IKBIPQ70UQ0 350 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SZRD1Q7Z422 152 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 ADGRG3Q86Y34 549 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MISPQ8IVT2 679 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CMIPQ8IY22 773 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SAMD14Q8IZD0 417 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SLC35F6Q8N357 371 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 C17orf78Q8N4C9 275 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MMGT1Q8N4V1 131 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TMCO5AQ8N6Q1 288 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TMEM99Q8N816 258 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 COX18Q8N8Q8 333 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CDRT4Q8N9R6 151 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 C1orf162Q8NEQ5 155 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 NUP37Q8NFH4 326 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 OR5W2Q8NH69 310 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GTF3AQ92664 365 aaKnown RBP4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CDKL2Q92772 493 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TSPAN32Q96QS1 320 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CITED1Q99966 193 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 CCDC106Q9BWC9 280 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 BTBD2Q9BX70 525 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 DPH5Q9H2P9 285 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MMP27Q9H306 513 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 POFUT1Q9H488 388 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SERHL2Q9H4I8 314 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 ZNF442Q9H7R0 627 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MIEF1Q9NQG6 463 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TNFRSF19Q9NS68 423 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 EMC3Q9P0I2 261 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TXNDC16Q9P2K2 825 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 MID2Q9UJV3 735 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 GRID1Q9ULK0 1009 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 SNX6Q9UNH7 406 aa4.49□□□□□ -1.69
PTPN4-209ENST00000469511 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-209ENST00000469511 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
PTPN4-209ENST00000469511 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
PTPN4-209ENST00000469511 A0A0G2JMP0 313 aa4.48□□□□□ -1.69
PTPN4-209ENST00000469511 A0A0X1KG70 313 aa4.48□□□□□ -1.69
PTPN4-209ENST00000469511 TMEM72A0PK05 275 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms