RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FAM46AQ96IP4 442 aaKnown RBP13.6□□□□□ -0.23
SNIP1-202ENST00000468040 PKP2Q99959 881 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 TTYH2Q9BSA4 534 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 RNF122Q9H9V4 155 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 NTN4Q9HB63 628 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 CHST11Q9NPF2 352 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 MPDZO75970 2070 aa13.6□□□□□ -0.23
SNIP1-202ENST00000468040 IGHV3-15A0A0B4J1V0 119 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 LRRN3E7EW58 273 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 M0R082 166 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 CYTIPO60759 359 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 VAMP5O95183 116 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 OR6A2O95222 327 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 TGM6O95932 706 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 MAKP20794 623 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 FPR3P25089 353 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 TIMP3P35625 211 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 GPR4P46093 362 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 SLC9A3P48764 834 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 TAF11Q15544 211 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ANKDD1AQ495B1 522 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF770Q6IQ21 691 aaPredicted RBP13.59□□□□□ -0.23
SNIP1-202ENST00000468040 HMBOX1Q6NT76 420 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 C1orf94Q6P1W5 598 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PGBD2Q6P3X8 592 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZER1Q7Z7L7 766 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 HIPK1Q86Z02 1210 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZDHHC13Q8IUH4 622 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 MCEMP1Q8IX19 187 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PQLC1Q8N2U9 271 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 SVOPLQ8N434 492 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 AQP11Q8NBQ7 271 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 OR5K1Q8NHB7 308 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF417Q8TAU3 575 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PRR7Q8TB68 274 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 GNPDA2Q8TDQ7 276 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ROBO4Q8WZ75 1007 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 SDCCAG3Q96C92 435 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZFP3Q96NJ6 502 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 ZNF587Q96SQ5 575 aaPredicted RBP13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PSD2Q9BQI7 771 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 GP6Q9HCN6 339 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 PDP1Q9P0J1 537 aaPredicted RBP13.59□□□□□ -0.23
SNIP1-202ENST00000468040 KLHL9Q9P2J3 617 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 MEMO1Q9Y316 297 aa13.59□□□□□ -0.23
SNIP1-202ENST00000468040 G3V2T6 193 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 CCL21O00585 134 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 KLF4O43474 513 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 AQP8O94778 261 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 BAG2O95816 211 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 PLGP00747 810 aaPredicted RBP13.58□□□□□ -0.24
SNIP1-202ENST00000468040 IL2RAP01589 272 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 GLI4P10075 376 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF23P17027 643 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 LAPTM4AQ15012 233 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 PDK3Q15120 406 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 RCN1Q15293 331 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 EIF2S3LQ2VIR3 472 aaKnown RBP13.58□□□□□ -0.24
SNIP1-202ENST00000468040 ABLIM2Q6H8Q1 611 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 TMEM179BQ7Z7N9 219 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 OAFQ86UD1 273 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 LRRC17Q8N6Y2 441 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 ABHD3Q8WU67 409 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 TACO1Q9BSH4 297 aaKnown RBP13.58□□□□□ -0.24
SNIP1-202ENST00000468040 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.24
SNIP1-202ENST00000468040 NDEL1Q9GZM8 345 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 SEMA6AQ9H2E6 1030 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 MGAT4BQ9UQ53 548 aa13.58□□□□□ -0.24
SNIP1-202ENST00000468040 PRRC2CQ9Y520 2896 aaKnown RBP13.58□□□□□ -0.24
SNIP1-202ENST00000468040 LOC102725191A0A1B0GVB3 256 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 A0A1W2PNV4 684 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 KDM4EB2RXH2 506 aaPredicted RBP13.57□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF814B7Z6K7 855 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 PLPP3O14495 311 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 CDC42EP2O14613 210 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 RCBTB2O95199 551 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 ADAP00813 363 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 ANXA8P13928 327 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 GSTM3P21266 225 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 GSSP48637 474 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 P2RY4P51582 365 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 SLC16A1P53985 500 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 PER3P56645 1201 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 RPS4XP62701 263 aaKnown RBP13.57□□□□□ -0.24
SNIP1-202ENST00000468040 PUDPQ08623 228 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 RASGEF1BQ0VAM2 473 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 PMPCAQ10713 525 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 TSPAN31Q12999 210 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 C4orf17Q53FE4 359 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 MTFR2Q6P444 385 aa13.57□□□□□ -0.24
SNIP1-202ENST00000468040 PLXDC2Q6UX71 529 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms