RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RPS19BP1Q86WX3 136 aaKnown RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 FOXN4Q96NZ1 517 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 TXNL4BQ9NX01 149 aaKnown RBP12.71□□□□□ -0.37
BRAT1-203ENST00000467558 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 KCND3Q9UK17 655 aa12.71□□□□□ -0.37
BRAT1-203ENST00000467558 CACNA1CQ13936 2221 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.38
BRAT1-203ENST00000467558 DNAJB6O75190 326 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 ATP6V1G1O75348 118 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 CSO75390 466 aaKnown RBP12.71□□□□□ -0.38
BRAT1-203ENST00000467558 CD46P15529 392 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.38
BRAT1-203ENST00000467558 LIPAP38571 399 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 MAGEA2P43356 314 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 FZD2Q14332 565 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 SF3B4Q15427 424 aaKnown RBP eCLIP12.71□□□□□ -0.381e-8■■■■■ 38.2
BRAT1-203ENST00000467558 PLEKHN1Q494U1 663 aaPredicted RBP12.71□□□□□ -0.38
BRAT1-203ENST00000467558 ANKRD34AQ69YU3 496 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF793Q6ZN11 406 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 SIMC1Q8NDZ2 872 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 PFN4Q8NHR9 129 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 IFI44Q8TCB0 444 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 GLS2Q9UI32 602 aa12.71□□□□□ -0.38
BRAT1-203ENST00000467558 ATG2BQ96BY7 2078 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 FUOMA2VDF0 154 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 PIAS2O75928 621 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 P2RX1P51575 399 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 GPR50Q13585 617 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SF3A2Q15428 464 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SLC35D3Q5M8T2 416 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM201Q5SNT2 666 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 C1orf140Q5VVS0 124 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 PARP16Q8N5Y8 322 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 Q96M85 177 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SLC6A7Q99884 636 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 UTP23Q9BRU9 249 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 NTN4Q9HB63 628 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM129A0AVI4 362 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 NOTOA8MTQ0 251 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 HPGDSO60760 199 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 RPS25P62851 125 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TGFBR3Q03167 851 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SMAD2Q15796 467 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 ACSM5Q6NUN0 579 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM71Q6P5X7 295 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TM9SF4Q92544 642 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TSLPQ969D9 159 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 THAP7Q9BT49 309 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 OR10A2Q9H208 303 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SLC38A1Q9H2H9 487 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 WDR76Q9H967 626 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SYNPO2LQ9H987 977 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 OTOL1A6NHN0 477 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 EIF1BO60739 113 aaKnown RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 MAKP20794 623 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SLC2A5P22732 501 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 UBE2UQ5VVX9 321 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TBC1D15Q8TC07 691 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 C1orf198Q9H425 327 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 SIAEQ9HAT2 523 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 WIF1Q9Y5W5 379 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 OR6C76A6NM76 312 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM212A6NML5 194 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 PRH1P02810 166 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 CD1EP15812 388 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 DNASE1P24855 282 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 TEAD3Q99594 435 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 ENKD1Q9H0I2 346 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 CLEC2DQ9UHP7 191 aa12.7□□□□□ -0.38
BRAT1-203ENST00000467558 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
BRAT1-203ENST00000467558 NUDT21O43809 227 aaKnown RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 GREM1O60565 184 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 MPIG6BO95866 241 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 AMY2AP04746 511 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 CLUP10909 449 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ARSBP15848 533 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 PCBD1P61457 104 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 FOXK1P85037 733 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 RIN1Q13671 783 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 NKG7Q16617 165 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 METAP1DQ6UB28 335 aaPredicted RBP12.69□□□□□ -0.38
BRAT1-203ENST00000467558 SLC35D2Q76EJ3 337 aa12.69□□□□□ -0.38
BRAT1-203ENST00000467558 SLC25A43Q8WUT9 341 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms