RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 OR9K2Q8NGE7 335 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 VANGL1Q8TAA9 524 aaPredicted RBP8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 LINC01560Q8TB33 94 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 DNAJA3Q96EY1 480 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 NSL1Q96IY1 281 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 EPYCQ99645 322 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 USB1Q9BQ65 265 aaKnown RBP8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 HDHD5Q9BXW7 423 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 C12orf49Q9H741 205 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 FANCFQ9NPI8 374 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 ADPRHL2Q9NX46 363 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 B3GAT1Q9P2W7 334 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 MALT1Q9UDY8 824 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 RASD1Q9Y272 281 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 B3GALT5Q9Y2C3 310 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 NOSIPQ9Y314 301 aaKnown RBP8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 CORINQ9Y5Q5 1042 aa8.39□□□□□ -1.07
SDCCAG3-208ENST00000466579 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 A6NNC1 897 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 GSTA4O15217 222 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 CTAG2O75638 210 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 PRSS23O95084 383 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 MT-ATP6P00846 226 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 SERPINA1P01009 418 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 TNFRSF1BP20333 461 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 CALB2P22676 271 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 CRYGSP22914 178 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 RBM34P42696 430 aaKnown RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 OR1E2P47887 323 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 SFRP5Q5T4F7 317 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 FBXW9Q5XUX1 488 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 GLYATQ6IB77 296 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 C22orf34Q6ZV56 151 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 CREB3L2Q70SY1 520 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 H1FNTQ75WM6 255 aaPredicted RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 TSEN54Q7Z6J9 526 aaKnown RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 VTCN1Q7Z7D3 282 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 EPHX4Q8IUS5 362 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 DEFB107AQ8IZN7 70 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 ARHGAP24Q8N264 748 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 BCAS4Q8TDM0 211 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 GEMIN6Q8WXD5 167 aaKnown RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 BOD1Q96IK1 185 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 PRRC1Q96M27 445 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 WFIKKN1Q96NZ8 548 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 CDRT15Q96T59 188 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 AMBRA1Q9C0C7 1298 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 C1orf21Q9H246 121 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 DCAF13Q9NV06 445 aaKnown RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 PARPBPQ9NWS1 579 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 MRPL39Q9NYK5 338 aaKnown RBP8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 ADA2Q9NZK5 511 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 PRSS50Q9UI38 385 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 SLC7A7Q9UM01 511 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 A4GNTQ9UNA3 340 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 LRBAP50851 2863 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 NOTCH2Q04721 2471 aa8.38□□□□□ -1.07
SDCCAG3-208ENST00000466579 AKAP9Q99996 3911 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 MAST4O15021 2626 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ABCA4P78363 2273 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 HTR3EA5X5Y0 456 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 B2RBV5 119 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 MS4A18H0YCH9 400 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 M0R082 166 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 MRPL33O75394 65 aaKnown RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ZNF432O94892 652 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ADAP00813 363 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 SEMG1P04279 462 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 IFNW1P05000 195 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 THBDP07204 575 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 TSPAN19P0C672 248 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 NCK1P16333 377 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 LOXP28300 417 aaPredicted RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 GRPRP30550 384 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ITGADQ13349 1161 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 PIN1Q13526 163 aaPredicted RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ZNF74Q16587 644 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 EXOC3L2Q2M3D2 409 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 MS4A18Q3C1V0 323 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 IQCCQ4KMZ1 466 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 IFI44LQ53G44 452 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 C1QTNF12Q5T7M4 302 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 TMEM225Q6GV28 225 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 TTC33Q6PID6 262 aaPredicted RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 CXorf67Q86X51 503 aaPredicted RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 P3H2Q8IVL5 708 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 NKAIN4Q8IVV8 208 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ZNF100Q8IYN0 542 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 OFCC1Q8IZS5 231 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 RBM15BQ8NDT2 890 aaKnown RBP8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 ZNF417Q8TAU3 575 aa8.37□□□□□ -1.07
SDCCAG3-208ENST00000466579 LIPHQ8WWY8 451 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms