RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SEMG1P04279 462 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 LGALS2P05162 132 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 OR8G3PP0DMU2 310 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 YWHABP31946 246 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 LONP1P36776 959 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 PTGDSP41222 190 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 ATP1B3P54709 279 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 HADHBP55084 474 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 SEC61GP60059 68 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 VGLL4Q14135 290 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 PIP5KL1Q5T9C9 394 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 OLFML2AQ68BL7 652 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 LRRC66Q68CR7 880 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 TFAP2EQ6VUC0 442 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 HSD17B13Q7Z5P4 300 aaPredicted RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 OFCC1Q8IZS5 231 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 CEP112Q8N8E3 955 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 BBS1Q8NFJ9 593 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 TCTEX1D2Q8WW35 142 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 MRPS31Q92665 395 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 NEIL2Q969S2 332 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 ISG20Q96AZ6 181 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 C19orf60Q96EN9 201 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 GAL3ST1Q99999 423 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 NMUR2Q9GZQ4 415 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 SMYD3Q9H7B4 428 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 ZFP14Q9HCL3 533 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 POLE4Q9NR33 117 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 PHF3Q92576 2039 aaKnown RBP3.37□□□□□ -1.87
USP25-207ENST00000464435 PHLPP2Q6ZVD8 1323 aa3.37□□□□□ -1.87
USP25-207ENST00000464435 PFKFB2O60825 505 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 ATP5LO75964 103 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 AP2A1O95782 977 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 LALBAP00709 142 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 IGHV3-48P01763 117 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 HSMCR30P0CW71 290 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RNH1P13489 461 aaKnown RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 NPR2P20594 1047 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 ZBTB25P24278 435 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 CD1BP29016 333 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 NTSP30990 170 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RPL13AP40429 203 aaKnown RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 RIPPLY3P57055 190 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 C21orf59P57076 290 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 RPS15P62841 145 aaKnown RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 CHRNB3Q05901 458 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 SLC15A2Q16348 729 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 ISXQ2M1V0 245 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 KLHL40Q2TBA0 621 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 PRR30Q53SZ7 412 aaPredicted RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 DMRTC1Q5HYR2 192 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 CTSL3PQ5NE16 218 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 C1orf220Q5T0J3 134 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 OR2G6Q5TZ20 316 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RAET1LQ5VY80 246 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 PPP1R27Q86WC6 154 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 TGIF2LXQ8IUE1 241 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 ZNF584Q8IVC4 421 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 KATNAL2Q8IYT4 538 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 FAM110BQ8TC76 370 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 SCFD1Q8WVM8 642 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 ATP6V1G3Q96LB4 118 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 PGLYRP4Q96LB8 373 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RNF2Q99496 336 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 PARD6BQ9BYG5 372 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 MRPL22Q9NWU5 206 aaKnown RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 GCNT4Q9P109 453 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 PACSIN2Q9UNF0 486 aaPredicted RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 CENPJQ9HC77 1338 aaPredicted RBP3.36□□□□□ -1.87
USP25-207ENST00000464435 NINLQ9Y2I6 1382 aa3.36□□□□□ -1.87
USP25-207ENST00000464435 RLFQ13129 1914 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 IGKV1D-8A0A087WSZ0 117 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 LOC100653049A0A140TA62 436 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 A0A1B0GVL5 298 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 SNTNA6NMZ2 147 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 IDSB3KWA1 339 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 E7ENQ6 273 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 CETN3O15182 167 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 RNF113AO15541 343 aaKnown RBP3.35□□□□□ -1.87
USP25-207ENST00000464435 AKR7A2O43488 359 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 TIMM8AO60220 97 aaPredicted RBP3.35□□□□□ -1.87
USP25-207ENST00000464435 KRT34O76011 436 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 LGI1O95970 557 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 TIMP1P01033 207 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 CSTAP01040 98 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 ZNF853P0CG23 659 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 TNNI1P19237 187 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 PSMB1P20618 241 aaKnown RBP3.35□□□□□ -1.87
USP25-207ENST00000464435 COX5AP20674 150 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 FDFT1P37268 417 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 DUSP3P51452 185 aaPredicted RBP3.35□□□□□ -1.87
USP25-207ENST00000464435 TPMTP51580 245 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 NDPQ00604 133 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 ENPEPQ07075 957 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 CCDC173Q0VFZ6 552 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 MERTKQ12866 999 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 NSUN5P1Q3KNT7 163 aa3.35□□□□□ -1.87
USP25-207ENST00000464435 CARD16Q5EG05 197 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms