RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 OPN3Q9H1Y3 402 aaPredicted RBP4.74□□□□□ -1.65
CD46-211ENST00000464082 CXXC4Q9H2H0 198 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 OR51I1Q9H343 314 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 TMEM185BQ9H7F4 350 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 PTGES2Q9H7Z7 377 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 PLEKHF2Q9H8W4 249 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 KCNK9Q9NPC2 374 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 ATAD3AQ9NVI7 634 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 THAP1Q9NVV9 213 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 ELOVL5Q9NYP7 299 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 FAM30AQ9NZY2 134 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 ZNF175Q9Y473 711 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 DTNAQ9Y4J8 743 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 CSPG4Q6UVK1 2322 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 NSD1Q96L73 2696 aaPredicted RBP4.74□□□□□ -1.65
CD46-211ENST00000464082 ABCA1O95477 2261 aa4.74□□□□□ -1.65
CD46-211ENST00000464082 FN1P02751 2386 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 A0A087WZY1 265 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CLDN24A6NM45 220 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 DEFB108AA8MXU0 73 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 HMGN4O00479 90 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 TNFSF11O14788 317 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 KLF11O14901 512 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CFLARO15519 480 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CXCL13O43927 109 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 H6PDO95479 791 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CPSF4O95639 269 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 CRHP06850 196 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CHRM2P08172 466 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CHRM4P08173 479 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 GUSBP08236 651 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 OR12D1P0DN82 309 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 KITP10721 976 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 RPS4Y1P22090 263 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 UQCRC2P22695 453 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 EDNRAP25101 427 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SOAT1P35610 550 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 P2RX1P51575 399 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 IST1P53990 364 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SUMO3P55854 103 aaPredicted RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 NME5P56597 212 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SKP2Q13309 424 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 FGFBP1Q14512 234 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SF3B4Q15427 424 aaKnown RBP eCLIP4.73□□□□□ -1.65
CD46-211ENST00000464082 ZNF239Q16600 458 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 GTDC1Q4AE62 458 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 AGBL2Q5U5Z8 902 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 HHATQ5VTY9 493 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 TNFAIP8L2Q6P589 184 aaPredicted RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 MTERF4Q7Z6M4 381 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 HMGN2P46Q86SG4 172 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CROCCP2Q86T23 111 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 TMEM200AQ86VY9 491 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 MISPQ8IVT2 679 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 C10orf111Q8N326 155 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 OR4A15Q8NGL6 344 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 B4GALNT2Q8NHY0 566 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 RAB3IL1Q8TBN0 382 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 RNF128Q8TEB7 428 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 FAM222BQ8WU58 562 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SMPDL3BQ92485 455 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 ZNF75CPQ92670 426 aaPredicted RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 RAB8BQ92930 207 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 VPS33AQ96AX1 596 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 MOAP1Q96BY2 351 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 WFIKKN1Q96NZ8 548 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 PRPF18Q99633 342 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 PAIP2Q9BPZ3 127 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 RBM24Q9BX46 236 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 LAT2Q9GZY6 243 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 QRSL1Q9H0R6 528 aaKnown RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 SLC38A1Q9H2H9 487 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 PIGMQ9H3S5 423 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 MANSC1Q9H8J5 431 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 BCO1Q9HAY6 547 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SLCO1B3Q9NPD5 702 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 SLC52A3Q9NQ40 469 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 BTNL2Q9UIR0 455 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 MKLN1Q9UL63 735 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 CLEC4AQ9UMR7 237 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 FAF1Q9UNN5 650 aaPredicted RBP4.73□□□□□ -1.65
CD46-211ENST00000464082 CARD8Q9Y2G2 431 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 ABCA2Q9BZC7 2435 aa4.73□□□□□ -1.65
CD46-211ENST00000464082 DSPPQ9NZW4 1301 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 NF1P21359 2839 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 SERINC4A6NH21 518 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 TUBAL3A6NHL2 446 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 CCDC154A6NI56 674 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 DUXAA6NLW8 204 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 ZNF264O43296 627 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 EIF4E2O60573 245 aaKnown RBP4.72□□□□□ -1.65
CD46-211ENST00000464082 SS18L1O75177 396 aaPredicted RBP4.72□□□□□ -1.65
CD46-211ENST00000464082 STX11O75558 287 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 AK1P00568 194 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 KRT16P08779 473 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 H2AFXP16104 143 aaPredicted RBP4.72□□□□□ -1.65
CD46-211ENST00000464082 DDX5P17844 614 aaKnown RBP4.72□□□□□ -1.65
CD46-211ENST00000464082 GATA3P23771 443 aa4.72□□□□□ -1.65
CD46-211ENST00000464082 ELK4P28324 431 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms