RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 IQCCQ4KMZ1 466 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 TUBA1AQ71U36 451 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 C6orf120Q7Z4R8 191 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 SPATA19Q7Z5L4 167 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 MEX3DQ86XN8 651 aaKnown RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 POU5F2Q8N7G0 328 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 SLC25A43Q8WUT9 341 aaPredicted RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 RAB8BQ92930 207 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 ZNF385AQ96PM9 386 aaKnown RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 VRK1Q99986 396 aaPredicted RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 WDR55Q9H6Y2 383 aaPredicted RBP13.64□□□□□ -0.23
SND1-203ENST00000463020 FKRPQ9H9S5 495 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 AMDHD2Q9Y303 409 aa13.64□□□□□ -0.23
SND1-203ENST00000463020 LOC390937A0A1W2PQ73 354 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 NDUFS8O00217 210 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 KCNAB3O43448 404 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 STX11O75558 287 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 VENTXO95231 258 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 CALCRP30988 508 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 APOBEC1P41238 236 aaKnown RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 SLC34A1Q06495 639 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 CYLC2Q14093 348 aaPredicted RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 SLC17A1Q14916 467 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 RCN1Q15293 331 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 TRIP10Q15642 601 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 C6orf136Q5SQH8 315 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 FRRS1Q6ZNA5 592 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 EIF3MQ7L2H7 374 aaKnown RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 NKX1-2Q9UD57 310 aaPredicted RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 PRPF19Q9UMS4 504 aaKnown RBP13.63□□□□□ -0.23
SND1-203ENST00000463020 HDGFL3Q9Y3E1 203 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
SND1-203ENST00000463020 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 NR5A2O00482 541 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 GPR171O14626 319 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 CFLARO15519 480 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 TCF21O43680 179 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 LILRA1O75019 489 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
SND1-203ENST00000463020 KRT34O76011 436 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 STAMBPO95630 424 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 OR4A8P0C604 315 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 OR12D1P0DN82 309 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 HNF1AP20823 631 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 EPHA3P29320 983 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 SERPINF1P36955 418 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 VHLP40337 213 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 ACTR3P61158 418 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 SQLEQ14534 574 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 OR4F3Q6IEY1 312 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 SLC46A3Q7Z3Q1 461 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 GRINAQ7Z429 371 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 SNX32Q86XE0 403 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 C17orf78Q8N4C9 275 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 ZNF563Q8TA94 476 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 TMEM234Q8WY98 164 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 MAELQ96JY0 434 aaKnown RBP13.62□□□□□ -0.23
SND1-203ENST00000463020 SLC35G5Q96KT7 338 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 DUSP26Q9BV47 211 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 ADAM19Q9H013 955 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 CA10Q9NS85 328 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 STX18Q9P2W9 335 aaKnown RBP13.62□□□□□ -0.23
SND1-203ENST00000463020 UPB1Q9UBR1 384 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 TRRAPQ9Y4A5 3859 aa13.62□□□□□ -0.23
SND1-203ENST00000463020 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 RNF103-CHMP3A0A140T963 221 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 LYNX1G3V0Z9 82 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SDHDO14521 159 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 KRT36O76013 467 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 LGI1O95970 557 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 FGF4P08620 206 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 CELA3BP08861 270 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 LYNX1P0DP58 116 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 G6PDP11413 515 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 BMP4P12644 408 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 MPGP29372 298 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 MAGEA8P43361 318 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
SND1-203ENST00000463020 PRPS1P60891 318 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SNRPD2P62316 118 aaKnown RBP13.61□□□□□ -0.23
SND1-203ENST00000463020 TAF11Q15544 211 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 PGS1Q32NB8 556 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 LIPNQ5VXI9 398 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 TNFAIP8L2Q6P589 184 aaPredicted RBP13.61□□□□□ -0.23
SND1-203ENST00000463020 DEFB107AQ8IZN7 70 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 RFLNBQ8N5W9 214 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SEMA6DQ8NFY4 1073 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 ZHX1-C8orf76Q96EF9 292 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 PPP1R36Q96LQ0 422 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SLC38A2Q96QD8 506 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 SNX18Q96RF0 628 aa13.61□□□□□ -0.23
SND1-203ENST00000463020 NELFAQ9H3P2 528 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms