RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 Q6ZR54 194 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 FAM220AQ7Z4H9 259 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 CDR2LQ86X02 465 aaPredicted RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 ERI1Q8IV48 349 aaKnown RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 BBS5Q8N3I7 341 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 C14orf178Q8N769 122 aaPredicted RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 CCDC71LQ8N9Z2 235 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 SDR9C7Q8NEX9 313 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 BBS1Q8NFJ9 593 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 OR52I1Q8NGK6 324 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 OR1L6Q8NGR2 347 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 PYROXD1Q8WU10 500 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 DNAJA4Q8WW22 397 aaPredicted RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 OR1E3Q8WZA6 343 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 FAM122AQ96E09 287 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 CMTM7Q96FZ5 175 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 TSNARE1Q96NA8 513 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 CNN2Q99439 309 aaKnown RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 CENPKQ9BS16 269 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 NUP58Q9BVL2 599 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 GBA3Q9H227 469 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 ANKRD19PQ9H560 264 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 TNFRSF19Q9NS68 423 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 PSMC3IPQ9P2W1 217 aaPredicted RBP2.34□□□□□ -2.03
VCL-203ENST00000461383 B4GALT7Q9UBV7 327 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 ASF1AQ9Y294 204 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 UGT2A1Q9Y4X1 527 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 PEX16Q9Y5Y5 336 aa2.34□□□□□ -2.03
VCL-203ENST00000461383 ZNF646O15015 1829 aaPredicted RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 IGHV3OR16-13A0A075B7E8 117 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 A0A0G2JRQ6 117 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ZFP92A6NM28 416 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 DYNC1I1O14576 645 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 HSD17B6O14756 317 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RNF13O43567 381 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 SERPIND1P05546 499 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GIG44P09565 113 aaPredicted RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 P0C879 139 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 IFNA8P32881 189 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 DDOSTP39656 456 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GLP1RP43220 463 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RGRP47804 291 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 KLK7P49862 253 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 KPNA2P52292 529 aaKnown RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 RPS14P62263 151 aaKnown RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 KCNJ2P63252 427 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 BEX3Q00994 111 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GK3PQ14409 553 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GNMTQ14749 295 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GPRC6AQ5T6X5 926 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 OR2G6Q5TZ20 316 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RSBN1Q5VWQ0 802 aaPredicted RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 TMIGD1Q6UXZ0 262 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RDH10Q8IZV5 341 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 TTC5Q8N0Z6 440 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ZNF740Q8NDX6 193 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 SPATA4Q8NEY3 305 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ZNF564Q8TBZ8 553 aaPredicted RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 FAM110BQ8TC76 370 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 FANK1Q8TC84 345 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 BRSK1Q8TDC3 778 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 HSFY1Q96LI6 401 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 TSG101Q99816 390 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ARHGDIGQ99819 225 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GPR61Q9BZJ8 451 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ZDHHC11Q9H8X9 412 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 ZFP14Q9HCL3 533 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 MRPL47Q9HD33 250 aaKnown RBP2.33□□□□□ -2.04
VCL-203ENST00000461383 SH2D2AQ9NP31 389 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 AIG1Q9NVV5 245 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RAB20Q9NX57 234 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 MMP17Q9ULZ9 603 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
VCL-203ENST00000461383 RBMY1BA6NDE4 496 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 RBMY1EA6NEQ0 496 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 EPOPA6NHQ4 379 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 E7ENQ6 273 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 GFYI3L273 518 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 PPP1R2P9O14990 202 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 MMP23AO75900 390 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 BBOX1O75936 387 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 AGTP01019 485 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 IGKV3-15P01624 115 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 IGHV3-48P01763 117 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 RBMY1DP0C7P1 496 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 ZNF853P0CG23 659 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 RBMY1A1P0DJD3 496 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 NPR2P20594 1047 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 CMA1P23946 247 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 COX7A1P24310 79 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 CXCR2P25025 360 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 HNRNPH3P31942 346 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 ATP5C1P36542 298 aaKnown RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 OPRD1P41143 372 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 CRYBB2P43320 205 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 KIR2DS4P43632 304 aa2.32□□□□□ -2.04
VCL-203ENST00000461383 VDAC2P45880 294 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 ARRB1P49407 418 aaPredicted RBP2.32□□□□□ -2.04
VCL-203ENST00000461383 PRMT2P55345 433 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms