RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 SLC7A7Q9UM01 511 aa8.96□□□□□ -0.98
RFX3-210ENST00000457373 NOSIPQ9Y314 301 aaKnown RBP8.96□□□□□ -0.98
RFX3-210ENST00000457373 USP9XQ93008 2570 aaPredicted RBP8.95□□□□□ -0.98
RFX3-210ENST00000457373 IGKV1D-42A0A075B6H8 117 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 TRAV36DV7A0A075B6V5 113 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 TUBAL3A6NHL2 446 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 ZNF716A6NP11 495 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 ZNF724A8MTY0 619 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 CHP2O43745 196 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 OR2T1O43869 369 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 T-ENOLP0DO92 83 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PRF1P14222 555 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 CALB2P22676 271 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PEX19P40855 299 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 TAS2R41P59536 307 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 H3F3AP84243 136 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 LTBQ06643 244 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PIN1Q13526 163 aaPredicted RBP8.95□□□□□ -0.98
RFX3-210ENST00000457373 PDK3Q15120 406 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 IFI44LQ53G44 452 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 FAM69AQ5T7M9 428 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 ANKRD34AQ69YU3 496 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PAQR6Q6TCH4 344 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 C5orf46Q6UWT4 87 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 LINC00114Q6XXX2 140 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 BEND4Q6ZU67 534 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 GDF7Q7Z4P5 450 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 GALNT5Q7Z7M9 940 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 GPAT4Q86UL3 456 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 ZNF100Q8IYN0 542 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 KDM8Q8N371 416 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 C10orf53Q8N6V4 93 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 ACBD4Q8NC06 268 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 RBM15BQ8NDT2 890 aaKnown RBP8.95□□□□□ -0.98
RFX3-210ENST00000457373 MFSD8Q8NHS3 518 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 TAAR8Q969N4 342 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 EPYCQ99645 322 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PTDSS2Q9BVG9 487 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 AMBRA1Q9C0C7 1298 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 C6orf203Q9P0P8 240 aaPredicted RBP8.95□□□□□ -0.98
RFX3-210ENST00000457373 PRSS50Q9UI38 385 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 PRRC2CQ9Y520 2896 aaKnown RBP8.95□□□□□ -0.98
RFX3-210ENST00000457373 CACNA1DQ01668 2161 aa8.95□□□□□ -0.98
RFX3-210ENST00000457373 IGKV3D-15A0A087WSY6 115 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 AQP7P3A6NL99 342 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 FTCDNL1E5RQL4 147 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 LRRN3E7EW58 273 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 KPNA4O00629 521 aaPredicted RBP8.94□□□□□ -0.98
RFX3-210ENST00000457373 GPR171O14626 319 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 MRPL33O75394 65 aaKnown RBP8.94□□□□□ -0.98
RFX3-210ENST00000457373 LYPD3O95274 346 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 ADAP00813 363 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 IGHV3-9P01782 118 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 BGLAPP02818 100 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 HSD17B1P14061 328 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 EDNRAP25101 427 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 GRPRP30550 384 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 OR3A2P47893 321 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 SORDQ00796 357 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 IL1RL1Q01638 556 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 TLE4Q04727 773 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 TNP2Q05952 138 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 SLC17A1Q14916 467 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 SAMD4BQ5PRF9 694 aaKnown RBP8.94□□□□□ -0.98
RFX3-210ENST00000457373 TFAP2EQ6VUC0 442 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 WDR88Q6ZMY6 472 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 TRPM8Q7Z2W7 1104 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 NKAIN4Q8IVV8 208 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 UBE2J2Q8N2K1 259 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 PRSS27Q9BQR3 290 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 TMEM43Q9BTV4 400 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 PCDHAC1Q9H158 963 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 FANCFQ9NPI8 374 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 CRIM1Q9NZV1 1036 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 EMC3Q9P0I2 261 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 RHCGQ9UBD6 479 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 SEC14L4Q9UDX3 406 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 KCNN3Q9UGI6 736 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 CD300AQ9UGN4 299 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 NDRG3Q9UGV2 375 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 RIMS3Q9UJD0 308 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 RPS6KA6Q9UK32 745 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 FLVCR1Q9Y5Y0 555 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 FREM1Q5H8C1 2179 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 DOPEY1Q5JWR5 2465 aa8.94□□□□□ -0.98
RFX3-210ENST00000457373 SH3D21A4FU49 640 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 C16orf97H3BN30 126 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 J3KTA2 159 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 M0R082 166 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 CASKO14936 926 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 UBOX5O94941 541 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 VAMP5O95183 116 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 OR5F1O95221 314 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 CH25HO95992 272 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 IFNW1P05000 195 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 NQO1P15559 274 aaKnown RBP8.93□□□□□ -0.98
RFX3-210ENST00000457373 IFNA8P32881 189 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 NTF4P34130 210 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 P2RY4P51582 365 aa8.93□□□□□ -0.98
RFX3-210ENST00000457373 SLC16A1P53985 500 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms